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An inferred fitness consequence map of the rice genome.
Joly-Lopez Z, Platts AE, Gulko B, Choi JY, Groen SC, Zhong X, Siepel A, Purugganan MD. Joly-Lopez Z, et al. Among authors: platts ae. Nat Plants. 2020 Feb;6(2):119-130. doi: 10.1038/s41477-019-0589-3. Epub 2020 Feb 10. Nat Plants. 2020. PMID: 32042156 Free PMC article.
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions.
Haudry A, Platts AE, Vello E, Hoen DR, Leclercq M, Williamson RJ, Forczek E, Joly-Lopez Z, Steffen JG, Hazzouri KM, Dewar K, Stinchcombe JR, Schoen DJ, Wang X, Schmutz J, Town CD, Edger PP, Pires JC, Schumaker KS, Jarvis DE, Mandáková T, Lysak MA, van den Bergh E, Schranz ME, Harrison PM, Moses AM, Bureau TE, Wright SI, Blanchette M. Haudry A, et al. Among authors: platts ae. Nat Genet. 2013 Aug;45(8):891-8. doi: 10.1038/ng.2684. Epub 2013 Jun 30. Nat Genet. 2013. PMID: 23817568 Free article.
The strength and pattern of natural selection on gene expression in rice.
Groen SC, Ćalić I, Joly-Lopez Z, Platts AE, Choi JY, Natividad M, Dorph K, Mauck WM 3rd, Bracken B, Cabral CLU, Kumar A, Torres RO, Satija R, Vergara G, Henry A, Franks SJ, Purugganan MD. Groen SC, et al. Among authors: platts ae. Nature. 2020 Feb;578(7796):572-576. doi: 10.1038/s41586-020-1997-2. Epub 2020 Feb 12. Nature. 2020. PMID: 32051590
Hybrid origins and the earliest stages of diploidization in the highly successful recent polyploid Capsella bursa-pastoris.
Douglas GM, Gos G, Steige KA, Salcedo A, Holm K, Josephs EB, Arunkumar R, Ågren JA, Hazzouri KM, Wang W, Platts AE, Williamson RJ, Neuffer B, Lascoux M, Slotte T, Wright SI. Douglas GM, et al. Among authors: platts ae. Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):2806-11. doi: 10.1073/pnas.1412277112. Epub 2015 Feb 17. Proc Natl Acad Sci U S A. 2015. PMID: 25691747 Free PMC article.
The Capsella rubella genome and the genomic consequences of rapid mating system evolution.
Slotte T, Hazzouri KM, Ågren JA, Koenig D, Maumus F, Guo YL, Steige K, Platts AE, Escobar JS, Newman LK, Wang W, Mandáková T, Vello E, Smith LM, Henz SR, Steffen J, Takuno S, Brandvain Y, Coop G, Andolfatto P, Hu TT, Blanchette M, Clark RM, Quesneville H, Nordborg M, Gaut BS, Lysak MA, Jenkins J, Grimwood J, Chapman J, Prochnik S, Shu S, Rokhsar D, Schmutz J, Weigel D, Wright SI. Slotte T, et al. Among authors: platts ae. Nat Genet. 2013 Jul;45(7):831-5. doi: 10.1038/ng.2669. Epub 2013 Jun 9. Nat Genet. 2013. PMID: 23749190
47 results