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Quality score compression improves genotyping accuracy.
Yu YW, Yorukoglu D, Peng J, Berger B. Yu YW, et al. Among authors: berger b. Nat Biotechnol. 2015 Mar;33(3):240-3. doi: 10.1038/nbt.3170. Nat Biotechnol. 2015. PMID: 25748910 Free PMC article. No abstract available.
Entropy-scaling search of massive biological data.
Yu YW, Daniels NM, Danko DC, Berger B. Yu YW, et al. Among authors: berger b. Cell Syst. 2015 Aug 26;1(2):130-140. doi: 10.1016/j.cels.2015.08.004. Cell Syst. 2015. PMID: 26436140 Free PMC article.
Compressive mapping for next-generation sequencing.
Yorukoglu D, Yu YW, Peng J, Berger B. Yorukoglu D, et al. Among authors: berger b. Nat Biotechnol. 2016 Apr;34(4):374-6. doi: 10.1038/nbt.3511. Nat Biotechnol. 2016. PMID: 27054987 Free PMC article. No abstract available.
Metagenomic binning through low-density hashing.
Luo Y, Yu YW, Zeng J, Berger B, Peng J. Luo Y, et al. Among authors: berger b. Bioinformatics. 2019 Jan 15;35(2):219-226. doi: 10.1093/bioinformatics/bty611. Bioinformatics. 2019. PMID: 30010790 Free PMC article.
Joker de Bruijn: Covering k-Mers Using Joker Characters.
Orenstein Y, Yu YW, Berger B. Orenstein Y, et al. Among authors: berger b. J Comput Biol. 2018 Nov;25(11):1171-1178. doi: 10.1089/cmb.2018.0032. Epub 2018 Aug 17. J Comput Biol. 2018. PMID: 30117747 Free PMC article.
1,551 results