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A single polyploidization event at the origin of the tetraploid genome of Coffea arabica is responsible for the extremely low genetic variation in wild and cultivated germplasm.
Scalabrin S, Toniutti L, Di Gaspero G, Scaglione D, Magris G, Vidotto M, Pinosio S, Cattonaro F, Magni F, Jurman I, Cerutti M, Suggi Liverani F, Navarini L, Del Terra L, Pellegrino G, Ruosi MR, Vitulo N, Valle G, Pallavicini A, Graziosi G, Klein PE, Bentley N, Murray S, Solano W, Al Hakimi A, Schilling T, Montagnon C, Morgante M, Bertrand B. Scalabrin S, et al. Among authors: vitulo n. Sci Rep. 2020 Mar 13;10(1):4642. doi: 10.1038/s41598-020-61216-7. Sci Rep. 2020. PMID: 32170172 Free PMC article.
Piezophilic adaptation: a genomic point of view.
Simonato F, Campanaro S, Lauro FM, Vezzi A, D'Angelo M, Vitulo N, Valle G, Bartlett DH. Simonato F, et al. Among authors: vitulo n. J Biotechnol. 2006 Oct 20;126(1):11-25. doi: 10.1016/j.jbiotec.2006.03.038. Epub 2006 Jun 14. J Biotechnol. 2006. PMID: 16780980 Review.
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyère C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro F, Anthouard V, Vico V, Del Fabbro C, Alaux M, Di Gaspero G, Dumas V, Felice N, Paillard S, Juman I, Moroldo M, Scalabrin S, Canaguier A, Le Clainche I, Malacrida G, Durand E, Pesole G, Laucou V, Chatelet P, Merdinoglu D, Delledonne M, Pezzotti M, Lecharny A, Scarpelli C, Artiguenave F, Pè ME, Valle G, Morgante M, Caboche M, Adam-Blondon AF, Weissenbach J, Quétier F, Wincker P; French-Italian Public Consortium for Grapevine Genome Characterization. Jaillon O, et al. Among authors: vitulo n. Nature. 2007 Sep 27;449(7161):463-7. doi: 10.1038/nature06148. Epub 2007 Aug 26. Nature. 2007. PMID: 17721507
PASS: a program to align short sequences.
Campagna D, Albiero A, Bilardi A, Caniato E, Forcato C, Manavski S, Vitulo N, Valle G. Campagna D, et al. Among authors: vitulo n. Bioinformatics. 2009 Apr 1;25(7):967-8. doi: 10.1093/bioinformatics/btp087. Epub 2009 Feb 13. Bioinformatics. 2009. PMID: 19218350
SATRAP: SOLiD Assembler TRAnslation Program.
Campagna D, Gasparini F, Franchi N, Manni L, Telatin A, Vitulo N, Ballarin L, Valle G. Campagna D, et al. Among authors: vitulo n. PLoS One. 2015 Sep 14;10(9):e0137436. doi: 10.1371/journal.pone.0137436. eCollection 2015. PLoS One. 2015. PMID: 26368549 Free PMC article.
82 results