DiRuggiero J - Search Results

1

Ribosome profiling in archaea reveals leaderless translation, novel translational initiation sites, and ribosome pausing at single codon resolution.

Gelsinger DR, Dallon E, Reddy R, Mohammad F, Buskirk AR, DiRuggiero J. Gelsinger DR, et al. Among authors: diruggiero j. Nucleic Acids Res. 2020 Jun 4;48(10):5201-5216. doi: 10.1093/nar/gkaa304. Nucleic Acids Res. 2020. PMID: 32382758 Free PMC article.

2

In situ metabolism in halite endolithic microbial communities of the hyperarid Atacama Desert.

Davila AF, Hawes I, Araya JG, Gelsinger DR, DiRuggiero J, Ascaso C, Osano A, Wierzchos J. Davila AF, et al. Among authors: diruggiero j. Front Microbiol. 2015 Oct 6;6:1035. doi: 10.3389/fmicb.2015.01035. eCollection 2015. Front Microbiol. 2015. PMID: 26500612 Free PMC article.

3

Functional interactions of archaea, bacteria and viruses in a hypersaline endolithic community.

Crits-Christoph A, Gelsinger DR, Ma B, Wierzchos J, Ravel J, Davila A, Casero MC, DiRuggiero J. Crits-Christoph A, et al. Among authors: diruggiero j. Environ Microbiol. 2016 Jun;18(6):2064-77. doi: 10.1111/1462-2920.13259. Epub 2016 Mar 21. Environ Microbiol. 2016. PMID: 26914534

4

Transcriptional Landscape and Regulatory Roles of Small Noncoding RNAs in the Oxidative Stress Response of the Haloarchaeon Haloferax volcanii.

Gelsinger DR, DiRuggiero J. Gelsinger DR, et al. Among authors: diruggiero j. J Bacteriol. 2018 Apr 9;200(9):e00779-17. doi: 10.1128/JB.00779-17. Print 2018 May 1. J Bacteriol. 2018. PMID: 29463600 Free PMC article.

5

The Non-Coding Regulatory RNA Revolution in Archaea.

Gelsinger DR, DiRuggiero J. Gelsinger DR, et al. Among authors: diruggiero j. Genes (Basel). 2018 Mar 5;9(3):141. doi: 10.3390/genes9030141. Genes (Basel). 2018. PMID: 29510582 Free PMC article. Review.

6

Regulatory Noncoding Small RNAs Are Diverse and Abundant in an Extremophilic Microbial Community.

Gelsinger DR, Uritskiy G, Reddy R, Munn A, Farney K, DiRuggiero J. Gelsinger DR, et al. Among authors: diruggiero j. mSystems. 2020 Feb 4;5(1):e00584-19. doi: 10.1128/mSystems.00584-19. mSystems. 2020. PMID: 32019831 Free PMC article.

7

Cellular life from the three domains and viruses are transcriptionally active in a hypersaline desert community.

Uritskiy G, Tisza MJ, Gelsinger DR, Munn A, Taylor J, DiRuggiero J. Uritskiy G, et al. Among authors: diruggiero j. Environ Microbiol. 2021 Jul;23(7):3401-3417. doi: 10.1111/1462-2920.15023. Epub 2020 May 6. Environ Microbiol. 2021. PMID: 32307861

8

Environmental Factors Driving Spatial Heterogeneity in Desert Halophile Microbial Communities.

Uritskiy G, Munn A, Dailey M, Gelsinger DR, Getsin S, Davila A, McCullough PR, Taylor J, DiRuggiero J. Uritskiy G, et al. Among authors: diruggiero j. Front Microbiol. 2020 Oct 20;11:578669. doi: 10.3389/fmicb.2020.578669. eCollection 2020. Front Microbiol. 2020. PMID: 33193201 Free PMC article.

9

Post-transcriptional regulation of redox homeostasis by the small RNA SHOxi in haloarchaea.

Gelsinger DR, Reddy R, Whittington K, Debic S, DiRuggiero J. Gelsinger DR, et al. Among authors: diruggiero j. RNA Biol. 2021 Nov;18(11):1867-1881. doi: 10.1080/15476286.2021.1874717. Epub 2021 Jan 31. RNA Biol. 2021. PMID: 33522404 Free PMC article.

10

Conversion of Ribosome-Protected mRNA to DNA and Deep Sequencing for Ribosome Profiling in Haloferax volcanii.

Gelsinger DR, Dallon E, DiRuggiero J. Gelsinger DR, et al. Among authors: diruggiero j. Methods Mol Biol. 2022;2522:223-242. doi: 10.1007/978-1-0716-2445-6_14. Methods Mol Biol. 2022. PMID: 36125753

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