Wang C - Search Results

1

IRIS3: integrated cell-type-specific regulon inference server from single-cell RNA-Seq.

Ma A, Wang C, Chang Y, Brennan FH, McDermaid A, Liu B, Zhang C, Popovich PG, Ma Q. Ma A, et al. Among authors: wang c. Nucleic Acids Res. 2020 Jul 2;48(W1):W275-W286. doi: 10.1093/nar/gkaa394. Nucleic Acids Res. 2020. PMID: 32421805 Free PMC article.

2

LncFinder: an integrated platform for long non-coding RNA identification utilizing sequence intrinsic composition, structural information and physicochemical property.

Han S, Liang Y, Ma Q, Xu Y, Zhang Y, Du W, Wang C, Li Y. Han S, et al. Among authors: wang c. Brief Bioinform. 2019 Nov 27;20(6):2009-2027. doi: 10.1093/bib/bby065. Brief Bioinform. 2019. PMID: 30084867 Free PMC article. Review.

3

A New Machine Learning-Based Framework for Mapping Uncertainty Analysis in RNA-Seq Read Alignment and Gene Expression Estimation.

McDermaid A, Chen X, Zhang Y, Wang C, Gu S, Xie J, Ma Q. McDermaid A, et al. Among authors: wang c. Front Genet. 2018 Aug 14;9:313. doi: 10.3389/fgene.2018.00313. eCollection 2018. Front Genet. 2018. PMID: 30154828 Free PMC article.

4

IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis.

Monier B, McDermaid A, Wang C, Zhao J, Miller A, Fennell A, Ma Q. Monier B, et al. Among authors: wang c. PLoS Comput Biol. 2019 Feb 14;15(2):e1006792. doi: 10.1371/journal.pcbi.1006792. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30763315 Free PMC article.

5

Using Machine Learning to Measure Relatedness Between Genes: A Multi-Features Model.

Wang Y, Yang S, Zhao J, Du W, Liang Y, Wang C, Zhou F, Tian Y, Ma Q. Wang Y, et al. Among authors: wang c. Sci Rep. 2019 Mar 12;9(1):4192. doi: 10.1038/s41598-019-40780-7. Sci Rep. 2019. PMID: 30862804 Free PMC article.

6

Improved Draft Genome Sequence of Bacillus sp. Strain YF23, Which Has Plant Growth-Promoting Activity.

Xia Y, DeBolt S, Ma Q, McDermaid A, Wang C, Shapiro N, Woyke T, Kyrpides NC. Xia Y, et al. Among authors: wang c. Microbiol Resour Announc. 2019 Apr 11;8(15):e00099-19. doi: 10.1128/MRA.00099-19. Microbiol Resour Announc. 2019. PMID: 30975803 Free PMC article.

7

Improved Draft Genome Sequence of Pseudomonas poae A2-S9, a Strain with Plant Growth-Promoting Activity.

Xia Y, DeBolt S, Ma Q, McDermaid A, Wang C, Shapiro N, Woyke T, Kyrpides NC. Xia Y, et al. Among authors: wang c. Microbiol Resour Announc. 2019 Apr 11;8(15):e00275-19. doi: 10.1128/MRA.00275-19. Microbiol Resour Announc. 2019. PMID: 30975811 Free PMC article.

8

Prediction of regulatory motifs from human Chip-sequencing data using a deep learning framework.

Yang J, Ma A, Hoppe AD, Wang C, Li Y, Zhang C, Wang Y, Liu B, Ma Q. Yang J, et al. Among authors: wang y, wang c. Nucleic Acids Res. 2019 Sep 5;47(15):7809-7824. doi: 10.1093/nar/gkz672. Nucleic Acids Res. 2019. PMID: 31372637 Free PMC article.

9

QUBIC2: a novel and robust biclustering algorithm for analyses and interpretation of large-scale RNA-Seq data.

Xie J, Ma A, Zhang Y, Liu B, Cao S, Wang C, Xu J, Zhang C, Ma Q. Xie J, et al. Among authors: wang c. Bioinformatics. 2020 Feb 15;36(4):1143-1149. doi: 10.1093/bioinformatics/btz692. Bioinformatics. 2020. PMID: 31503285 Free PMC article.

10

CirRNAPL: A web server for the identification of circRNA based on extreme learning machine.

Niu M, Zhang J, Li Y, Wang C, Liu Z, Ding H, Zou Q, Ma Q. Niu M, et al. Among authors: wang c. Comput Struct Biotechnol J. 2020 Apr 2;18:834-842. doi: 10.1016/j.csbj.2020.03.028. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32308930 Free PMC article.

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