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Ultraplex: A rapid, flexible, all-in-one fastq demultiplexer.
Wilkins OG, Capitanchik C, Luscombe NM, Ule J. Wilkins OG, et al. Among authors: capitanchik c. Wellcome Open Res. 2021 Jun 7;6:141. doi: 10.12688/wellcomeopenres.16791.1. eCollection 2021. Wellcome Open Res. 2021. PMID: 34286104 Free PMC article.
RNA modifications detection by comparative Nanopore direct RNA sequencing.
Leger A, Amaral PP, Pandolfini L, Capitanchik C, Capraro F, Miano V, Migliori V, Toolan-Kerr P, Sideri T, Enright AJ, Tzelepis K, van Werven FJ, Luscombe NM, Barbieri I, Ule J, Fitzgerald T, Birney E, Leonardi T, Kouzarides T. Leger A, et al. Among authors: capitanchik c. Nat Commun. 2021 Dec 10;12(1):7198. doi: 10.1038/s41467-021-27393-3. Nat Commun. 2021. PMID: 34893601 Free PMC article.
N6-methyladenosine (m6A) reader Pho92 is recruited co-transcriptionally and couples translation to mRNA decay to promote meiotic fitness in yeast.
Varier RA, Sideri T, Capitanchik C, Manova Z, Calvani E, Rossi A, Edupuganti RR, Ensinck I, Chan VWC, Patel H, Kirkpatrick J, Faull P, Snijders AP, Vermeulen M, Ralser M, Ule J, Luscombe NM, van Werven FJ. Varier RA, et al. Among authors: capitanchik c. Elife. 2022 Nov 24;11:e84034. doi: 10.7554/eLife.84034. Elife. 2022. PMID: 36422864 Free PMC article.
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