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SARS-CoV-2 receptor networks in diabetic and COVID-19 associated kidney disease.
Menon R, Otto EA, Sealfon R, Nair V, Wong AK, Theesfeld CL, Chen X, Wang Y, Boppanna A, Luo J, Yang Y, Kasson PM, Schaub JA, Berthier CC, Eddy S, Lienczewski CC, Godfrey B, Dagenais SL, Sohaney R, Hartman J, Fermin D, Subramanian L, Looker HC, Harder JL, Mariani LH, Hodgin JB, Sexton JZ, Wobus CE, Naik AS, Nelson RG, Troyanskaya OG, Kretzler M. Menon R, et al. Among authors: yang y. medRxiv [Preprint]. 2020 Aug 21:2020.05.09.20096511. doi: 10.1101/2020.05.09.20096511. medRxiv. 2020. Update in: Kidney Int. 2020 Dec;98(6):1502-1518. doi: 10.1016/j.kint.2020.09.015 PMID: 32511461 Free PMC article. Updated. Preprint.
SARS-CoV-2 receptor networks in diabetic and COVID-19-associated kidney disease.
Menon R, Otto EA, Sealfon R, Nair V, Wong AK, Theesfeld CL, Chen X, Wang Y, Boppana AS, Luo J, Yang Y, Kasson PM, Schaub JA, Berthier CC, Eddy S, Lienczewski CC, Godfrey B, Dagenais SL, Sohaney R, Hartman J, Fermin D, Subramanian L, Looker HC, Harder JL, Mariani LH, Hodgin JB, Sexton JZ, Wobus CE, Naik AS, Nelson RG, Troyanskaya OG, Kretzler M. Menon R, et al. Among authors: yang y. Kidney Int. 2020 Dec;98(6):1502-1518. doi: 10.1016/j.kint.2020.09.015. Epub 2020 Oct 8. Kidney Int. 2020. PMID: 33038424 Free PMC article.
Unsupervised machine learning for identifying important visual features through bag-of-words using histopathology data from chronic kidney disease.
Lee J, Warner E, Shaikhouni S, Bitzer M, Kretzler M, Gipson D, Pennathur S, Bellovich K, Bhat Z, Gadegbeku C, Massengill S, Perumal K, Saha J, Yang Y, Luo J, Zhang X, Mariani L, Hodgin JB, Rao A; C-PROBE Study. Lee J, et al. Among authors: yang y. Sci Rep. 2022 Mar 22;12(1):4832. doi: 10.1038/s41598-022-08974-8. Sci Rep. 2022. PMID: 35318420 Free PMC article.
Attenuated kidney oxidative metabolism in young adults with type 1 diabetes.
Choi YJ, Richard G, Zhang G, Hodgin JB, Demeke DS, Yang Y, Schaub JA, Tamayo IM, Gurung BK, Naik AS, Nair V, Birznieks C, MacDonald A, Narongkiatikhun P, Gross S, Driscoll L, Flynn M, Tommerdahl K, Nadeau KJ, Shah VN, Vigers T, Snell-Bergeon JK, Kendrick J, van Raalte DH, Li LP, Prasad P, Ladd P, Chin BB, Cherney DZ, McCown PJ, Alakwaa F, Otto EA, Brosius FC, Saulnier PJ, Puelles VG, Goodrich JA, Street K, Venkatachalam MA, Ruiz A, de Boer IH, Nelson RG, Pyle L, Blondin DP, Sharma K, Kretzler M, Bjornstad P. Choi YJ, et al. Among authors: yang y. J Clin Invest. 2024 Oct 22;134(24):e183984. doi: 10.1172/JCI183984. J Clin Invest. 2024. PMID: 39436695 Free PMC article. Clinical Trial.
Clustering-based spatial analysis (CluSA) framework through graph neural network for chronic kidney disease prediction using histopathology images.
Lee J, Warner E, Shaikhouni S, Bitzer M, Kretzler M, Gipson D, Pennathur S, Bellovich K, Bhat Z, Gadegbeku C, Massengill S, Perumal K, Saha J, Yang Y, Luo J, Zhang X, Mariani L, Hodgin JB, Rao A. Lee J, et al. Among authors: yang y. Sci Rep. 2023 Aug 5;13(1):12701. doi: 10.1038/s41598-023-39591-8. Sci Rep. 2023. PMID: 37543648 Free PMC article.
miRNA and mRNA Signatures in Human Acute Kidney Injury Tissue.
Janosevic D, De Luca T, Melo Ferreira R, Gisch DL, Cheng YH, Hato T, Luo J, Yang Y, Hodgin JB, Phillips CL, Dagher PC; Kidney Precision Medicine Project; Eadon MT. Janosevic D, et al. Among authors: yang y. Am J Pathol. 2025 Jan;195(1):102-114. doi: 10.1016/j.ajpath.2024.08.013. Epub 2024 Sep 25. Am J Pathol. 2025. PMID: 39332675
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