Li F - Search Results

1

Single-Cell RNA-Seq Mapping of Human Thymopoiesis Reveals Lineage Specification Trajectories and a Commitment Spectrum in T Cell Development.

Le J, Park JE, Ha VL, Luong A, Branciamore S, Rodin AS, Gogoshin G, Li F, Loh YE, Camacho V, Patel SB, Welner RS, Parekh C. Le J, et al. Among authors: li f. Immunity. 2020 Jun 16;52(6):1105-1118.e9. doi: 10.1016/j.immuni.2020.05.010. Immunity. 2020. PMID: 32553173 Free PMC article.

2

Integrated Single-Cell RNA-Sequencing Analysis of Aquaporin 5-Expressing Mouse Lung Epithelial Cells Identifies GPRC5A as a Novel Validated Type I Cell Surface Marker.

Horie M, Castaldi A, Sunohara M, Wang H, Ji Y, Liu Y, Li F, Wilkinson TA, Hung L, Shen H, Kage H, Offringa IA, Marconett CN, Flodby P, Zhou B, Borok Z. Horie M, et al. Among authors: li f. Cells. 2020 Nov 11;9(11):2460. doi: 10.3390/cells9112460. Cells. 2020. PMID: 33187367 Free PMC article.

3

metamicrobiomeR: an R package for analysis of microbiome relative abundance data using zero-inflated beta GAMLSS and meta-analysis across studies using random effects models.

Ho NT, Li F, Wang S, Kuhn L. Ho NT, et al. Among authors: li f. BMC Bioinformatics. 2019 Apr 16;20(1):188. doi: 10.1186/s12859-019-2744-2. BMC Bioinformatics. 2019. PMID: 30991942 Free PMC article.

4

A Method for Targeted 16S Sequencing of Human Milk Samples.

Tobin NH, Woodward C, Zabih S, Lee DJ, Li F, Aldrovandi GM. Tobin NH, et al. Among authors: li f. J Vis Exp. 2018 Mar 23;(133):56974. doi: 10.3791/56974. J Vis Exp. 2018. PMID: 29630048 Free PMC article.

5

Contributions to human breast milk microbiome and enteromammary transfer of Bifidobacterium breve.

Kordy K, Gaufin T, Mwangi M, Li F, Cerini C, Lee DJ, Adisetiyo H, Woodward C, Pannaraj PS, Tobin NH, Aldrovandi GM. Kordy K, et al. Among authors: li f. PLoS One. 2020 Jan 28;15(1):e0219633. doi: 10.1371/journal.pone.0219633. eCollection 2020. PLoS One. 2020. PMID: 31990909 Free PMC article.

6

Validation and Retrospective Clinical Evaluation of a Quantitative 16S rRNA Gene Metagenomic Sequencing Assay for Bacterial Pathogen Detection in Body Fluids.

Culbreath K, Melanson S, Gale J, Baker J, Li F, Saebo O, Kommedal O, Contreras D, Garner OB, Yang S. Culbreath K, et al. Among authors: li f. J Mol Diagn. 2019 Sep;21(5):913-923. doi: 10.1016/j.jmoldx.2019.05.002. Epub 2019 Jun 21. J Mol Diagn. 2019. PMID: 31229651 Free article.

7

Quantification of variation and the impact of biomass in targeted 16S rRNA gene sequencing studies.

Bender JM, Li F, Adisetiyo H, Lee D, Zabih S, Hung L, Wilkinson TA, Pannaraj PS, She RC, Bard JD, Tobin NH, Aldrovandi GM. Bender JM, et al. Among authors: li f. Microbiome. 2018 Sep 10;6(1):155. doi: 10.1186/s40168-018-0543-z. Microbiome. 2018. PMID: 30201048 Free PMC article.

8

Early exposure to antibiotics in the neonatal intensive care unit alters the taxonomic and functional infant gut microbiome.

Bender JM, Li F, Purswani H, Capretz T, Cerini C, Zabih S, Hung L, Francis N, Chin S, Pannaraj PS, Aldrovandi G. Bender JM, et al. Among authors: li f. J Matern Fetal Neonatal Med. 2021 Oct;34(20):3335-3343. doi: 10.1080/14767058.2019.1684466. Epub 2019 Nov 19. J Matern Fetal Neonatal Med. 2021. PMID: 31744351 Free PMC article.

9

TNF Receptor 1 Promotes Early-Life Immunity and Protects against Colitis in Mice.

Liu CY, Tam SS, Huang Y, Dubé PE, Alhosh R, Girish N, Punit S, Nataneli S, Li F, Bender JM, Washington MK, Polk DB. Liu CY, et al. Among authors: li f. Cell Rep. 2020 Oct 20;33(3):108275. doi: 10.1016/j.celrep.2020.108275. Cell Rep. 2020. PMID: 33086075 Free PMC article.

10

Longitudinal relationship between the gut microbiota variation and diversity and gut graft-versus-host disease (GVHD) following pediatric allogeneic hematopoietic cell transplantation (HCT) - Case series.

Gray AN, Tobin NH, Moore TB, Li F, Aldrovandi GM. Gray AN, et al. Among authors: li f. Int J Med Microbiol. 2023 May;313(3):151580. doi: 10.1016/j.ijmm.2023.151580. Epub 2023 Apr 25. Int J Med Microbiol. 2023. PMID: 37121094 Free article.

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