Awazu A - Search Results

1

Ultrasensitive Change in Nucleosome Binding by Multiple Phosphorylations to the Intrinsically Disordered Region of the Histone Chaperone FACT.

Aoki D, Awazu A, Fujii M, Uewaki JI, Hashimoto M, Tochio N, Umehara T, Tate SI. Aoki D, et al. Among authors: awazu a. J Mol Biol. 2020 Jul 24;432(16):4637-4657. doi: 10.1016/j.jmb.2020.06.011. Epub 2020 Jun 15. J Mol Biol. 2020. PMID: 32553729

2

Saddle-node bifurcation to jammed state for quasi-one-dimensional counter-chemotactic flow.

Fujii M, Awazu A, Nishimori H. Fujii M, et al. Among authors: awazu a. Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Jul;82(1 Pt 2):015102. doi: 10.1103/PhysRevE.82.015102. Epub 2010 Jul 21. Phys Rev E Stat Nonlin Soft Matter Phys. 2010. PMID: 20866675

3

Segregation-pattern reorientation of a granular mixture on a horizontally oscillating tray.

Fujii M, Awazu A, Nishimori H. Fujii M, et al. Among authors: awazu a. Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Apr;85(4 Pt 1):041304. doi: 10.1103/PhysRevE.85.041304. Epub 2012 Apr 16. Phys Rev E Stat Nonlin Soft Matter Phys. 2012. PMID: 22680466 Free article.

4

Influences of excluded volume of molecules on signaling processes on the biomembrane.

Fujii M, Nishimori H, Awazu A. Fujii M, et al. Among authors: awazu a. PLoS One. 2013 May 2;8(5):e62218. doi: 10.1371/journal.pone.0062218. Print 2013. PLoS One. 2013. PMID: 23658714 Free PMC article.

5

Simple Elastic Network Models for Exhaustive Analysis of Long Double-Stranded DNA Dynamics with Sequence Geometry Dependence.

Isami S, Sakamoto N, Nishimori H, Awazu A. Isami S, et al. Among authors: awazu a. PLoS One. 2015 Dec 1;10(12):e0143760. doi: 10.1371/journal.pone.0143760. eCollection 2015. PLoS One. 2015. PMID: 26624614 Free PMC article.

6

Prediction of nucleosome positioning by the incorporation of frequencies and distributions of three different nucleotide segment lengths into a general pseudo k-tuple nucleotide composition.

Awazu A. Awazu A. Bioinformatics. 2017 Jan 1;33(1):42-48. doi: 10.1093/bioinformatics/btw562. Epub 2016 Aug 25. Bioinformatics. 2017. PMID: 27563027 Free PMC article.

7

Insulator Activities of Nucleosome-Excluding DNA Sequences without Bound Chromatin Looping Proteins.

Matsushima Y, Sakamoto N, Awazu A. Matsushima Y, et al. Among authors: awazu a. J Phys Chem B. 2019 Feb 7;123(5):1035-1043. doi: 10.1021/acs.jpcb.8b10518. Epub 2019 Jan 23. J Phys Chem B. 2019. PMID: 30620587

8

Affinity of rhodopsin to raft enables the aligned oligomer formation from dimers: Coarse-grained molecular dynamics simulation of disk membranes.

Kaneshige Y, Hayashi F, Morigaki K, Tanimoto Y, Yamashita H, Fujii M, Awazu A. Kaneshige Y, et al. Among authors: awazu a. PLoS One. 2020 Feb 7;15(2):e0226123. doi: 10.1371/journal.pone.0226123. eCollection 2020. PLoS One. 2020. PMID: 32032370 Free PMC article.

9

Partial exogastrulation due to apical-basal polarity of F-actin distribution disruption in sea urchin embryo by omeprazole.

Watanabe K, Yasui Y, Kurose Y, Fujii M, Yamamoto T, Sakamoto N, Awazu A. Watanabe K, et al. Among authors: awazu a. Genes Cells. 2022 Jun;27(6):392-408. doi: 10.1111/gtc.12934. Epub 2022 Apr 9. Genes Cells. 2022. PMID: 35347809 Free PMC article.

10

Identification of aberrant transcription termination at specific gene loci with DNA hypomethylated transcription termination sites caused by DNA methyltransferase deficiency.

Shirai M, Nara T, Takahashi H, Takayama K, Chen Y, Hirose Y, Fujii M, Awazu A, Shimoda N, Kikuchi Y. Shirai M, et al. Among authors: awazu a. Genes Genet Syst. 2022 Oct 18;97(3):139-152. doi: 10.1266/ggs.21-00092. Epub 2022 Sep 6. Genes Genet Syst. 2022. PMID: 35718462 Free article.

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