Gnanakaran S - Search Results

1

Anionic Lipids Impact RAS-Binding Site Accessibility and Membrane Binding Affinity of CRAF RBD-CRD.

Travers T, López CA, Agamasu C, Hettige JJ, Messing S, García AE, Stephen AG, Gnanakaran S. Travers T, et al. Among authors: gnanakaran s. Biophys J. 2020 Aug 4;119(3):525-538. doi: 10.1016/j.bpj.2020.06.021. Epub 2020 Jun 27. Biophys J. 2020. PMID: 32649863 Free PMC article.

2

Folding of a highly conserved diverging turn motif from the SH3 domain.

Gnanakaran S, Garcia AE. Gnanakaran S, et al. Biophys J. 2003 Mar;84(3):1548-62. doi: 10.1016/S0006-3495(03)74966-2. Biophys J. 2003. PMID: 12609860 Free PMC article.

3

Peptide folding simulations.

Gnanakaran S, Nymeyer H, Portman J, Sanbonmatsu KY, García AE. Gnanakaran S, et al. Curr Opin Struct Biol. 2003 Apr;13(2):168-74. doi: 10.1016/s0959-440x(03)00040-x. Curr Opin Struct Biol. 2003. PMID: 12727509 Review.

4

Atomic simulations of protein folding, using the replica exchange algorithm.

Nymeyer H, Gnanakaran S, García AE. Nymeyer H, et al. Among authors: gnanakaran s. Methods Enzymol. 2004;383:119-49. doi: 10.1016/S0076-6879(04)83006-4. Methods Enzymol. 2004. PMID: 15063649 No abstract available.

5

Nature of structural inhomogeneities on folding a helix and their influence on spectral measurements.

Gnanakaran S, Hochstrasser RM, García AE. Gnanakaran S, et al. Proc Natl Acad Sci U S A. 2004 Jun 22;101(25):9229-34. doi: 10.1073/pnas.0402933101. Epub 2004 Jun 14. Proc Natl Acad Sci U S A. 2004. PMID: 15197256 Free PMC article.

6

Simulations of the pressure and temperature unfolding of an alpha-helical peptide.

Paschek D, Gnanakaran S, Garcia AE. Paschek D, et al. Among authors: gnanakaran s. Proc Natl Acad Sci U S A. 2005 May 10;102(19):6765-70. doi: 10.1073/pnas.0408527102. Epub 2005 Mar 30. Proc Natl Acad Sci U S A. 2005. PMID: 15800045 Free PMC article.

7

Helix-coil transition of alanine peptides in water: force field dependence on the folded and unfolded structures.

Gnanakaran S, García AE. Gnanakaran S, et al. Proteins. 2005 Jun 1;59(4):773-82. doi: 10.1002/prot.20439. Proteins. 2005. PMID: 15815975

8

Atomic-level description of amyloid beta-dimer formation.

Gnanakaran S, Nussinov R, García AE. Gnanakaran S, et al. J Am Chem Soc. 2006 Feb 22;128(7):2158-9. doi: 10.1021/ja0548337. J Am Chem Soc. 2006. PMID: 16478138

9

Perturbation of local solvent structure by a small dication: a theoretical study on structural, vibrational, and reactive properties of beryllium ion in water.

Gnanakaran S, Scott B, McCleskey TM, Garcia AE. Gnanakaran S, et al. J Phys Chem B. 2008 Mar 13;112(10):2958-63. doi: 10.1021/jp076001w. Epub 2008 Feb 19. J Phys Chem B. 2008. PMID: 18281967

10

The stability of cellulose: a statistical perspective from a coarse-grained model of hydrogen-bond networks.

Shen T, Gnanakaran S. Shen T, et al. Among authors: gnanakaran s. Biophys J. 2009 Apr 22;96(8):3032-40. doi: 10.1016/j.bpj.2008.12.3953. Biophys J. 2009. PMID: 19383449 Free PMC article.

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