Liu B - Search Results

1

IDP-Seq2Seq: identification of intrinsically disordered regions based on sequence to sequence learning.

Tang YJ, Pang YH, Liu B. Tang YJ, et al. Among authors: liu b. Bioinformatics. 2021 Jan 29;36(21):5177-5186. doi: 10.1093/bioinformatics/btaa667. Bioinformatics. 2021. PMID: 32702119

2

Combining evolutionary information extracted from frequency profiles with sequence-based kernels for protein remote homology detection.

Liu B, Zhang D, Xu R, Xu J, Wang X, Chen Q, Dong Q, Chou KC. Liu B, et al. Bioinformatics. 2014 Feb 15;30(4):472-9. doi: 10.1093/bioinformatics/btt709. Epub 2013 Dec 5. Bioinformatics. 2014. PMID: 24318998 Free PMC article.

3

repDNA: a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effects.

Liu B, Liu F, Fang L, Wang X, Chou KC. Liu B, et al. Among authors: liu f. Bioinformatics. 2015 Apr 15;31(8):1307-9. doi: 10.1093/bioinformatics/btu820. Epub 2014 Dec 10. Bioinformatics. 2015. PMID: 25504848

4

Application of learning to rank to protein remote homology detection.

Liu B, Chen J, Wang X. Liu B, et al. Bioinformatics. 2015 Nov 1;31(21):3492-8. doi: 10.1093/bioinformatics/btv413. Epub 2015 Jul 10. Bioinformatics. 2015. PMID: 26163693

5

iEnhancer-2L: a two-layer predictor for identifying enhancers and their strength by pseudo k-tuple nucleotide composition.

Liu B, Fang L, Long R, Lan X, Chou KC. Liu B, et al. Bioinformatics. 2016 Feb 1;32(3):362-9. doi: 10.1093/bioinformatics/btv604. Epub 2015 Oct 17. Bioinformatics. 2016. PMID: 26476782

6

iDHS-EL: identifying DNase I hypersensitive sites by fusing three different modes of pseudo nucleotide composition into an ensemble learning framework.

Liu B, Long R, Chou KC. Liu B, et al. Bioinformatics. 2016 Aug 15;32(16):2411-8. doi: 10.1093/bioinformatics/btw186. Epub 2016 Apr 8. Bioinformatics. 2016. PMID: 27153623

7

iRSpot-EL: identify recombination spots with an ensemble learning approach.

Liu B, Wang S, Long R, Chou KC. Liu B, et al. Bioinformatics. 2017 Jan 1;33(1):35-41. doi: 10.1093/bioinformatics/btw539. Epub 2016 Aug 16. Bioinformatics. 2017. PMID: 27531102

8

A comprehensive review and comparison of different computational methods for protein remote homology detection.

Chen J, Guo M, Wang X, Liu B. Chen J, et al. Among authors: liu b. Brief Bioinform. 2018 Mar 1;19(2):231-244. doi: 10.1093/bib/bbw108. Brief Bioinform. 2018. PMID: 27881430 Review.

9

iPromoter-2L: a two-layer predictor for identifying promoters and their types by multi-window-based PseKNC.

Liu B, Yang F, Huang DS, Chou KC. Liu B, et al. Bioinformatics. 2018 Jan 1;34(1):33-40. doi: 10.1093/bioinformatics/btx579. Bioinformatics. 2018. PMID: 28968797

10

ProtDec-LTR2.0: an improved method for protein remote homology detection by combining pseudo protein and supervised Learning to Rank.

Chen J, Guo M, Li S, Liu B. Chen J, et al. Among authors: liu b. Bioinformatics. 2017 Nov 1;33(21):3473-3476. doi: 10.1093/bioinformatics/btx429. Bioinformatics. 2017. PMID: 29077805

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