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BIN1 protein isoforms are differentially expressed in astrocytes, neurons, and microglia: neuronal and astrocyte BIN1 are implicated in tau pathology.
Taga M, Petyuk VA, White C, Marsh G, Ma Y, Klein HU, Connor SM, Kroshilina A, Yung CJ, Khairallah A, Olah M, Schneider J, Karhohs K, Carpenter AE, Ransohoff R, Bennett DA, Crotti A, Bradshaw EM, De Jager PL. Taga M, et al. Among authors: carpenter ae. Mol Neurodegener. 2020 Jul 29;15(1):44. doi: 10.1186/s13024-020-00387-3. Mol Neurodegener. 2020. PMID: 32727516 Free PMC article.
Increased expression of the immune modulatory molecule PD-L1 (CD274) in anaplastic meningioma.
Du Z, Abedalthagafi M, Aizer AA, McHenry AR, Sun HH, Bray MA, Viramontes O, Machaidze R, Brastianos PK, Reardon DA, Dunn IF, Freeman GJ, Ligon KL, Carpenter AE, Alexander BM, Agar NY, Rodig SJ, Bradshaw EM, Santagata S. Du Z, et al. Among authors: carpenter ae. Oncotarget. 2015 Mar 10;6(7):4704-16. doi: 10.18632/oncotarget.3082. Oncotarget. 2015. PMID: 25609200 Free PMC article.
Nucleus segmentation across imaging experiments: the 2018 Data Science Bowl.
Caicedo JC, Goodman A, Karhohs KW, Cimini BA, Ackerman J, Haghighi M, Heng C, Becker T, Doan M, McQuin C, Rohban M, Singh S, Carpenter AE. Caicedo JC, et al. Among authors: carpenter ae. Nat Methods. 2019 Dec;16(12):1247-1253. doi: 10.1038/s41592-019-0612-7. Epub 2019 Oct 21. Nat Methods. 2019. PMID: 31636459 Free PMC article.
High-content, label-free analysis of proplatelet production from megakaryocytes.
French SL, Vijey P, Karhohs KW, Wilkie AR, Horin LJ, Ray A, Posorske B, Carpenter AE, Machlus KR, Italiano JE Jr. French SL, et al. Among authors: carpenter ae. J Thromb Haemost. 2020 Oct;18(10):2701-2711. doi: 10.1111/jth.15012. Epub 2020 Aug 23. J Thromb Haemost. 2020. PMID: 32662223 Free PMC article.
A multiparametric activity profiling platform for neuron disease phenotyping and drug screening.
Boivin B, Roet KCD, Huang X, Karhohs KW, Rohban MH, Sandoe J, Wiskow O, Maeda R, Grantham A, Dornon MK, Shao J, Frost D, Baker D, Eggan K, Carpenter AE, Woolf CJ. Boivin B, et al. Among authors: carpenter ae. Mol Biol Cell. 2022 May 15;33(6):ar54. doi: 10.1091/mbc.E21-10-0481. Epub 2021 Dec 15. Mol Biol Cell. 2022. PMID: 34910584 Free PMC article.
Morphology and gene expression profiling provide complementary information for mapping cell state.
Way GP, Natoli T, Adeboye A, Litichevskiy L, Yang A, Lu X, Caicedo JC, Cimini BA, Karhohs K, Logan DJ, Rohban MH, Kost-Alimova M, Hartland K, Bornholdt M, Chandrasekaran SN, Haghighi M, Weisbart E, Singh S, Subramanian A, Carpenter AE. Way GP, et al. Among authors: carpenter ae. Cell Syst. 2022 Nov 16;13(11):911-923.e9. doi: 10.1016/j.cels.2022.10.001. Epub 2022 Oct 28. Cell Syst. 2022. PMID: 36395727 Free PMC article.
CellProfiler 3.0: Next-generation image processing for biology.
McQuin C, Goodman A, Chernyshev V, Kamentsky L, Cimini BA, Karhohs KW, Doan M, Ding L, Rafelski SM, Thirstrup D, Wiegraebe W, Singh S, Becker T, Caicedo JC, Carpenter AE. McQuin C, et al. Among authors: carpenter ae. PLoS Biol. 2018 Jul 3;16(7):e2005970. doi: 10.1371/journal.pbio.2005970. eCollection 2018 Jul. PLoS Biol. 2018. PMID: 29969450 Free PMC article.
216 results