Elmas A - Search Results

1

Cooperation Between Distinct Cancer Driver Genes Underlies Intertumor Heterogeneity in Hepatocellular Carcinoma.

Molina-Sánchez P, Ruiz de Galarreta M, Yao MA, Lindblad KE, Bresnahan E, Bitterman E, Martin TC, Rubenstein T, Nie K, Golas J, Choudhary S, Bárcena-Varela M, Elmas A, Miguela V, Ding Y, Kan Z, Grinspan LT, Huang KL, Parsons RE, Shields DJ, Rollins RA, Lujambio A. Molina-Sánchez P, et al. Among authors: elmas a. Gastroenterology. 2020 Dec;159(6):2203-2220.e14. doi: 10.1053/j.gastro.2020.08.015. Epub 2020 Aug 16. Gastroenterology. 2020. PMID: 32814112 Free PMC article.

2

Proteomic Analyses Identify Therapeutic Targets in Hepatocellular Carcinoma.

Elmas A, Lujambio A, Huang KL. Elmas A, et al. Front Oncol. 2022 Mar 30;12:814120. doi: 10.3389/fonc.2022.814120. eCollection 2022. Front Oncol. 2022. PMID: 35433463 Free PMC article.

3

Pan-cancer proteogenomic investigations identify post-transcriptional kinase targets.

Elmas A, Tharakan S, Jaladanki S, Galsky MD, Liu T, Huang KL. Elmas A, et al. Commun Biol. 2021 Sep 22;4(1):1112. doi: 10.1038/s42003-021-02636-7. Commun Biol. 2021. PMID: 34552204 Free PMC article.

4

Genetic dependency of Alzheimer's disease-associated genes across cells and tissue types.

Jaladanki SK, Elmas A, Malave GS, Huang KL. Jaladanki SK, et al. Among authors: elmas a. Sci Rep. 2021 Jun 8;11(1):12107. doi: 10.1038/s41598-021-91713-2. Sci Rep. 2021. PMID: 34103633 Free PMC article.

5

Spatially interacting phosphorylation sites and mutations in cancer.

Huang KL, Scott AD, Zhou DC, Wang LB, Weerasinghe A, Elmas A, Liu R, Wu Y, Wendl MC, Wyczalkowski MA, Baral J, Sengupta S, Lai CW, Ruggles K, Payne SH, Raphael B, Fenyö D, Chen K, Mills G, Ding L. Huang KL, et al. Among authors: elmas a. Nat Commun. 2021 Apr 19;12(1):2313. doi: 10.1038/s41467-021-22481-w. Nat Commun. 2021. PMID: 33875650 Free PMC article.

6

Maximum parsimony xor haplotyping by sparse dictionary selection.

Elmas A, Jajamovich GH, Wang X. Elmas A, et al. BMC Genomics. 2013 Sep 23;14:645. doi: 10.1186/1471-2164-14-645. BMC Genomics. 2013. PMID: 24059285 Free PMC article.

7

Reconstruction of novel transcription factor regulons through inference of their binding sites.

Elmas A, Wang X, Samoilov MS. Elmas A, et al. BMC Bioinformatics. 2015 Sep 21;16:299. doi: 10.1186/s12859-015-0685-y. BMC Bioinformatics. 2015. PMID: 26388177 Free PMC article.

8

Discovering Genome-Wide Tag SNPs Based on the Mutual Information of the Variants.

Elmas A, Ou Yang TH, Wang X, Anastassiou D. Elmas A, et al. PLoS One. 2016 Dec 16;11(12):e0167994. doi: 10.1371/journal.pone.0167994. eCollection 2016. PLoS One. 2016. PMID: 27992465 Free PMC article.

9

Reverse engineering gene regulatory networks from measurement with missing values.

Ogundijo OE, Elmas A, Wang X. Ogundijo OE, et al. Among authors: elmas a. EURASIP J Bioinform Syst Biol. 2017 Jan 10;2017(1):2. doi: 10.1186/s13637-016-0055-8. eCollection 2016 Dec. EURASIP J Bioinform Syst Biol. 2017. PMID: 28127303 Free PMC article.

10

The folded k-spectrum kernel: A machine learning approach to detecting transcription factor binding sites with gapped nucleotide dependencies.

Elmas A, Wang X, Dresch JM. Elmas A, et al. PLoS One. 2017 Oct 5;12(10):e0185570. doi: 10.1371/journal.pone.0185570. eCollection 2017. PLoS One. 2017. PMID: 28982128 Free PMC article.

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