Meng J - Search Results

1

m6A-Atlas: a comprehensive knowledgebase for unraveling the N6-methyladenosine (m6A) epitranscriptome.

Tang Y, Chen K, Song B, Ma J, Wu X, Xu Q, Wei Z, Su J, Liu G, Rong R, Lu Z, de Magalhães JP, Rigden DJ, Meng J. Tang Y, et al. Among authors: meng j. Nucleic Acids Res. 2021 Jan 8;49(D1):D134-D143. doi: 10.1093/nar/gkaa692. Nucleic Acids Res. 2021. PMID: 32821938 Free PMC article.

2

A protocol for RNA methylation differential analysis with MeRIP-Seq data and exomePeak R/Bioconductor package.

Meng J, Lu Z, Liu H, Zhang L, Zhang S, Chen Y, Rao MK, Huang Y. Meng J, et al. Methods. 2014 Oct 1;69(3):274-81. doi: 10.1016/j.ymeth.2014.06.008. Epub 2014 Jun 27. Methods. 2014. PMID: 24979058 Free PMC article.

3

Guitar: An R/Bioconductor Package for Gene Annotation Guided Transcriptomic Analysis of RNA-Related Genomic Features.

Cui X, Wei Z, Zhang L, Liu H, Sun L, Zhang SW, Huang Y, Meng J. Cui X, et al. Among authors: meng j. Biomed Res Int. 2016;2016:8367534. doi: 10.1155/2016/8367534. Epub 2016 Apr 28. Biomed Res Int. 2016. PMID: 27239475 Free PMC article.

4

Viral and cellular N⁶-methyladenosine and N⁶,2'-O-dimethyladenosine epitranscriptomes in the KSHV life cycle.

Tan B, Liu H, Zhang S, da Silva SR, Zhang L, Meng J, Cui X, Yuan H, Sorel O, Zhang SW, Huang Y, Gao SJ. Tan B, et al. Among authors: meng j. Nat Microbiol. 2018 Jan;3(1):108-120. doi: 10.1038/s41564-017-0056-8. Epub 2017 Nov 6. Nat Microbiol. 2018. PMID: 29109479 Free PMC article.

5

MeT-DB V2.0: elucidating context-specific functions of N6-methyl-adenosine methyltranscriptome.

Liu H, Wang H, Wei Z, Zhang S, Hua G, Zhang SW, Zhang L, Gao SJ, Meng J, Chen X, Huang Y. Liu H, et al. Among authors: meng j. Nucleic Acids Res. 2018 Jan 4;46(D1):D281-D287. doi: 10.1093/nar/gkx1080. Nucleic Acids Res. 2018. PMID: 29126312 Free PMC article.

Since its inception in 2014, the Met-DB (Liu, H., Flores, M.A., Meng, J., Zhang, L., Zhao, X., Rao, M.K., Chen, Y. and Huang, Y. (2015) MeT-DB: a database of transcriptome methylation in mammalian cells. ...

Since its inception in 2014, the Met-DB (Liu, H., Flores, M.A., Meng, J., Zhang, L., Zhao, X., Rao, M.K., Chen, Y. and Huang, …

6

Functional examination of novel kisspeptin phosphinic peptides.

Zhang X, Matziari M, Xie Y, Fernig D, Rong R, Meng J, Lu ZL. Zhang X, et al. Among authors: meng j. PLoS One. 2018 Apr 3;13(4):e0195089. doi: 10.1371/journal.pone.0195089. eCollection 2018. PLoS One. 2018. PMID: 29614094 Free PMC article.

7

Topological Characterization of Human and Mouse m⁵C Epitranscriptome Revealed by Bisulfite Sequencing.

Wei Z, Panneerdoss S, Timilsina S, Zhu J, Mohammad TA, Lu ZL, de Magalhães JP, Chen Y, Rong R, Huang Y, Rao MK, Meng J. Wei Z, et al. Among authors: meng j. Int J Genomics. 2018 Jun 13;2018:1351964. doi: 10.1155/2018/1351964. eCollection 2018. Int J Genomics. 2018. PMID: 30009162 Free PMC article.

8

Enhancing Epitranscriptome Module Detection from m⁶A-Seq Data Using Threshold-Based Measurement Weighting Strategy.

Chen K, Wei Z, Liu H, de Magalhães JP, Rong R, Lu Z, Meng J. Chen K, et al. Among authors: meng j. Biomed Res Int. 2018 Jun 14;2018:2075173. doi: 10.1155/2018/2075173. eCollection 2018. Biomed Res Int. 2018. PMID: 30013979 Free PMC article.

9

WHISTLE: a high-accuracy map of the human N6-methyladenosine (m6A) epitranscriptome predicted using a machine learning approach.

Chen K, Wei Z, Zhang Q, Wu X, Rong R, Lu Z, Su J, de Magalhães JP, Rigden DJ, Meng J. Chen K, et al. Among authors: meng j. Nucleic Acids Res. 2019 Apr 23;47(7):e41. doi: 10.1093/nar/gkz074. Nucleic Acids Res. 2019. PMID: 30993345 Free PMC article.

10

DRUM: Inference of Disease-Associated m⁶A RNA Methylation Sites From a Multi-Layer Heterogeneous Network.

Tang Y, Chen K, Wu X, Wei Z, Zhang SY, Song B, Zhang SW, Huang Y, Meng J. Tang Y, et al. Among authors: meng j. Front Genet. 2019 Apr 3;10:266. doi: 10.3389/fgene.2019.00266. eCollection 2019. Front Genet. 2019. PMID: 31001320 Free PMC article.

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