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HPV-EM: an accurate HPV detection and genotyping EM algorithm.
Inkman MJ, Jayachandran K, Ellis TM, Ruiz F, McLellan MD, Miller CA, Wu Y, Ojesina AI, Schwarz JK, Zhang J. Inkman MJ, et al. Sci Rep. 2020 Aug 31;10(1):14340. doi: 10.1038/s41598-020-71300-7. Sci Rep. 2020. PMID: 32868873 Free PMC article.
Standardized Uptake Value for 18F-Fluorodeoxyglucose Is a Marker of Inflammatory State and Immune Infiltrate in Cervical Cancer.
Floberg JM, Zhang J, Muhammad N, DeWees TA, Inkman M, Chen K, Lin AJ, Rashmi R, Jayachandran K, Edelson BT, Siegel BA, Dehdashti F, Grigsby PW, Markovina S, Schwarz JK. Floberg JM, et al. Clin Cancer Res. 2021 Aug 1;27(15):4245-4255. doi: 10.1158/1078-0432.CCR-20-4450. Epub 2021 Apr 5. Clin Cancer Res. 2021. PMID: 33820781 Free PMC article.
HPV transcript expression affects cervical cancer response to chemoradiation.
Ruiz FJ, Inkman M, Rashmi R, Muhammad N, Gabriel N, Miller CA, McLellan MD, Goldstein M, Markovina S, Grigsby PW, Zhang J, Schwarz JK. Ruiz FJ, et al. JCI Insight. 2021 Aug 23;6(16):e138734. doi: 10.1172/jci.insight.138734. JCI Insight. 2021. PMID: 34255749 Free PMC article.
[No title available]
[No authors listed] [No authors listed] PMID: 34700648
DANSR: A Tool for the Detection of Annotated and Novel Small RNAs.
Zhang J, Eteleeb AM, Rozycki EB, Inkman MJ, Ly A, Scharf RE, Jayachandran K, Krasnick BA, Mazur T, White NM, Fields RC, Maher CA. Zhang J, et al. Among authors: inkman mj. Noncoding RNA. 2022 Jan 13;8(1):9. doi: 10.3390/ncrna8010009. Noncoding RNA. 2022. PMID: 35076605 Free PMC article.
Pan-Cancer Analysis Reveals Recurrent BCAR4 Gene Fusions across Solid Tumors.
Nickless A, Zhang J, Othoum G, Webster J, Inkman MJ, Coonrod E, Fontes S, Rozycki EB, Maher CA, White NM. Nickless A, et al. Among authors: inkman mj. Mol Cancer Res. 2022 Oct 4;20(10):1481-1488. doi: 10.1158/1541-7786.MCR-21-0775. Mol Cancer Res. 2022. PMID: 35852383 Free PMC article.
SCCA1/SERPINB3 suppresses antitumor immunity and blunts therapy-induced T cell responses via STAT-dependent chemokine production.
Chen L, Shi V, Wang S, Sun L, Freeman R, Yang J, Inkman MJ, Ghosh S, Ruiz F, Jayachandran K, Huang Y, Luo J, Zhang J, Cosper P, Luke CJ, Spina CS, Grigsby PW, Schwarz JK, Markovina S. Chen L, et al. Among authors: inkman mj. J Clin Invest. 2023 Aug 1;133(15):e163841. doi: 10.1172/JCI163841. J Clin Invest. 2023. PMID: 37279067 Free PMC article.
Genetic characterization of primary and metastatic high-grade serous ovarian cancer tumors reveals distinct features associated with survival.
Kotnik EN, Mullen MM, Spies NC, Li T, Inkman M, Zhang J, Martins-Rodrigues F, Hagemann IS, McCourt CK, Thaker PH, Hagemann AR, Powell MA, Mutch DG, Khabele D, Longmore GD, Mardis ER, Maher CA, Miller CA, Fuh KC. Kotnik EN, et al. Commun Biol. 2023 Jul 3;6(1):688. doi: 10.1038/s42003-023-05026-3. Commun Biol. 2023. PMID: 37400526 Free PMC article.
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