Liu Y - Search Results

1

The translational landscape of SARS-CoV-2 and infected cells.

Puray-Chavez M, Lee N, Tenneti K, Wang Y, Vuong HR, Liu Y, Horani A, Huang T, Gunsten SP, Case JB, Yang W, Diamond MS, Brody SL, Dougherty J, Kutluay SB. Puray-Chavez M, et al. Among authors: liu y. bioRxiv [Preprint]. 2021 Oct 7:2020.11.03.367516. doi: 10.1101/2020.11.03.367516. bioRxiv. 2021. Update in: mBio. 2022 Jun 28;13(3):e0081522. doi: 10.1128/mbio.00815-22 PMID: 33173862 Free PMC article. Updated. Preprint.

2

CNS microRNA profiles: a database for cell type enriched microRNA expression across the mouse central nervous system.

Pomper N, Liu Y, Hoye ML, Dougherty JD, Miller TM. Pomper N, et al. Among authors: liu y. Sci Rep. 2020 Mar 18;10(1):4921. doi: 10.1038/s41598-020-61307-5. Sci Rep. 2020. PMID: 32188880 Free PMC article.

3

utr.annotation: a tool for annotating genomic variants that could influence post-transcriptional regulation.

Liu Y, Dougherty JD. Liu Y, et al. Bioinformatics. 2021 Nov 5;37(21):3926-3928. doi: 10.1093/bioinformatics/btab635. Bioinformatics. 2021. PMID: 34478494 Free PMC article.

4

The Translational Landscape of SARS-CoV-2-infected Cells Reveals Suppression of Innate Immune Genes.

Puray-Chavez M, Lee N, Tenneti K, Wang Y, Vuong HR, Liu Y, Horani A, Huang T, Gunsten SP, Case JB, Yang W, Diamond MS, Brody SL, Dougherty J, Kutluay SB. Puray-Chavez M, et al. Among authors: liu y. mBio. 2022 Jun 28;13(3):e0081522. doi: 10.1128/mbio.00815-22. Epub 2022 May 23. mBio. 2022. PMID: 35604092 Free PMC article.

5

A Massively Parallel Screen of 5'UTR Mutations Identifies Variants Impacting Translation and Protein Production in Neurodevelopmental Disorder Genes.

Plassmeyer SP, Florian CP, Kasper MJ, Chase R, Mueller S, Liu Y, White KM, Jungers CF, Djuranovic SP, Djuranovic S, Dougherty JD. Plassmeyer SP, et al. Among authors: liu y. medRxiv [Preprint]. 2023 Nov 3:2023.11.02.23297961. doi: 10.1101/2023.11.02.23297961. medRxiv. 2023. PMID: 37961498 Free PMC article. Preprint.

6

Functions of Gtf2i and Gtf2ird1 in the developing brain: transcription, DNA binding and long-term behavioral consequences.

Kopp ND, Nygaard KR, Liu Y, McCullough KB, Maloney SE, Gabel HW, Dougherty JD. Kopp ND, et al. Among authors: liu y. Hum Mol Genet. 2020 Jun 3;29(9):1498-1519. doi: 10.1093/hmg/ddaa070. Hum Mol Genet. 2020. PMID: 32313931 Free PMC article.

7

CLIP and Massively Parallel Functional Analysis of CELF6 Reveal a Role in Destabilizing Synaptic Gene mRNAs through Interaction with 3' UTR Elements.

Rieger MA, King DM, Crosby H, Liu Y, Cohen BA, Dougherty JD. Rieger MA, et al. Among authors: liu y. Cell Rep. 2020 Dec 22;33(12):108531. doi: 10.1016/j.celrep.2020.108531. Cell Rep. 2020. PMID: 33357440 Free PMC article.

8

Loss of Quaking RNA binding protein disrupts the expression of genes associated with astrocyte maturation in mouse brain.

Sakers K, Liu Y, Llaci L, Lee SM, Vasek MJ, Rieger MA, Brophy S, Tycksen E, Lewis R, Maloney SE, Dougherty JD. Sakers K, et al. Among authors: liu y. Nat Commun. 2021 Mar 9;12(1):1537. doi: 10.1038/s41467-021-21703-5. Nat Commun. 2021. PMID: 33750804 Free PMC article.

9

Single-Cell Deconvolution of Head and Neck Squamous Cell Carcinoma.

Qi Z, Liu Y, Mints M, Mullins R, Sample R, Law T, Barrett T, Mazul AL, Jackson RS, Kang SY, Pipkorn P, Parikh AS, Tirosh I, Dougherty J, Puram SV. Qi Z, et al. Among authors: liu y. Cancers (Basel). 2021 Mar 11;13(6):1230. doi: 10.3390/cancers13061230. Cancers (Basel). 2021. PMID: 33799782 Free PMC article.

10

Activity-dependent translation dynamically alters the proteome of the perisynaptic astrocyte process.

Sapkota D, Kater MSJ, Sakers K, Nygaard KR, Liu Y, Koester SK, Fass SB, Lake AM, Khazanchi R, Khankan RR, Krawczyk MC, Smit AB, Maloney SE, Verheijen MHG, Zhang Y, Dougherty JD. Sapkota D, et al. Among authors: liu y. Cell Rep. 2022 Oct 18;41(3):111474. doi: 10.1016/j.celrep.2022.111474. Cell Rep. 2022. PMID: 36261025 Free PMC article.

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