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In vitro induction of neoantigen-specific T cells in myelodysplastic syndrome, a disease with low mutational burden.
Ferrari V, Tarke A, Fields H, Ferrari L, Conley T, Ferrari F, Koşaloğlu-Yalçın Z, Sette A, Peters B, McCarthy CL, Bashey A, Tzachanis D, Ball ED, Tanaka TN, Bejar R, Lane TA, Vitiello A. Ferrari V, et al. Cytotherapy. 2021 Apr;23(4):320-328. doi: 10.1016/j.jcyt.2020.10.003. Epub 2020 Nov 28. Cytotherapy. 2021. PMID: 33262074 Free article.
Predicting T cell recognition of MHC class I restricted neoepitopes.
Koşaloğlu-Yalçın Z, Lanka M, Frentzen A, Logandha Ramamoorthy Premlal A, Sidney J, Vaughan K, Greenbaum J, Robbins P, Gartner J, Sette A, Peters B. Koşaloğlu-Yalçın Z, et al. Oncoimmunology. 2018 Aug 27;7(11):e1492508. doi: 10.1080/2162402X.2018.1492508. eCollection 2018. Oncoimmunology. 2018. PMID: 30377561 Free PMC article.
De novo mutations in mitochondrial DNA of iPSCs produce immunogenic neoepitopes in mice and humans.
Deuse T, Hu X, Agbor-Enoh S, Koch M, Spitzer MH, Gravina A, Alawi M, Marishta A, Peters B, Kosaloglu-Yalcin Z, Yang Y, Rajalingam R, Wang D, Nashan B, Kiefmann R, Reichenspurner H, Valantine H, Weissman IL, Schrepfer S. Deuse T, et al. Nat Biotechnol. 2019 Oct;37(10):1137-1144. doi: 10.1038/s41587-019-0227-7. Epub 2019 Aug 19. Nat Biotechnol. 2019. PMID: 31427818
The Cancer Epitope Database and Analysis Resource: A Blueprint for the Establishment of a New Bioinformatics Resource for Use by the Cancer Immunology Community.
Koşaloğlu-Yalçın Z, Blazeska N, Carter H, Nielsen M, Cohen E, Kufe D, Conejo-Garcia J, Robbins P, Schoenberger SP, Peters B, Sette A. Koşaloğlu-Yalçın Z, et al. Front Immunol. 2021 Aug 24;12:735609. doi: 10.3389/fimmu.2021.735609. eCollection 2021. Front Immunol. 2021. PMID: 34504503 Free PMC article.
Predicting the Success of Fmoc-Based Peptide Synthesis.
Gutman I, Gutman R, Sidney J, Chihab L, Mishto M, Liepe J, Chiem A, Greenbaum J, Yan Z, Sette A, Koşaloğlu-Yalçın Z, Peters B. Gutman I, et al. ACS Omega. 2022 Jun 27;7(27):23771-23781. doi: 10.1021/acsomega.2c02425. eCollection 2022 Jul 12. ACS Omega. 2022. PMID: 35847273 Free PMC article.
21 results