Weng C - Search Results

1

Natural language processing (NLP) tools in extracting biomedical concepts from research articles: a case study on autism spectrum disorder.

Peng J, Zhao M, Havrilla J, Liu C, Weng C, Guthrie W, Schultz R, Wang K, Zhou Y. Peng J, et al. Among authors: weng c. BMC Med Inform Decis Mak. 2020 Dec 30;20(Suppl 11):322. doi: 10.1186/s12911-020-01352-2. BMC Med Inform Decis Mak. 2020. PMID: 33380331 Free PMC article.

2

Extracting temporal constraints from clinical research eligibility criteria using conditional random fields.

Luo Z, Johnson SB, Lai AM, Weng C. Luo Z, et al. Among authors: weng c. AMIA Annu Symp Proc. 2011;2011:843-52. Epub 2011 Oct 22. AMIA Annu Symp Proc. 2011. PMID: 22195142 Free PMC article.

3

EliIE: An open-source information extraction system for clinical trial eligibility criteria.

Kang T, Zhang S, Tang Y, Hruby GW, Rusanov A, Elhadad N, Weng C. Kang T, et al. Among authors: weng c. J Am Med Inform Assoc. 2017 Nov 1;24(6):1062-1071. doi: 10.1093/jamia/ocx019. J Am Med Inform Assoc. 2017. PMID: 28379377 Free PMC article.

4

An OMOP CDM-Based Relational Database of Clinical Research Eligibility Criteria.

Si Y, Weng C. Si Y, et al. Among authors: weng c. Stud Health Technol Inform. 2017;245:950-954. Stud Health Technol Inform. 2017. PMID: 29295240 Free PMC article.

5

Deep Phenotyping on Electronic Health Records Facilitates Genetic Diagnosis by Clinical Exomes.

Son JH, Xie G, Yuan C, Ena L, Li Z, Goldstein A, Huang L, Wang L, Shen F, Liu H, Mehl K, Groopman EE, Marasa M, Kiryluk K, Gharavi AG, Chung WK, Hripcsak G, Friedman C, Weng C, Wang K. Son JH, et al. Among authors: weng c. Am J Hum Genet. 2018 Jul 5;103(1):58-73. doi: 10.1016/j.ajhg.2018.05.010. Epub 2018 Jun 28. Am J Hum Genet. 2018. PMID: 29961570 Free PMC article.

6

A two-site survey of medical center personnel's willingness to share clinical data for research: implications for reproducible health NLP research.

Weng C, Friedman C, Rommel CA, Hurdle JF. Weng C, et al. BMC Med Inform Decis Mak. 2019 Apr 4;19(Suppl 3):70. doi: 10.1186/s12911-019-0778-z. BMC Med Inform Decis Mak. 2019. PMID: 30943963 Free PMC article.

7

Complexities, variations, and errors of numbering within clinical notes: the potential impact on information extraction and cohort-identification.

Hanauer DA, Mei Q, Vydiswaran VGV, Singh K, Landis-Lewis Z, Weng C. Hanauer DA, et al. Among authors: weng c. BMC Med Inform Decis Mak. 2019 Apr 4;19(Suppl 3):75. doi: 10.1186/s12911-019-0784-1. BMC Med Inform Decis Mak. 2019. PMID: 30944012 Free PMC article.

8

Doc2Hpo: a web application for efficient and accurate HPO concept curation.

Liu C, Peres Kury FS, Li Z, Ta C, Wang K, Weng C. Liu C, et al. Among authors: weng c. Nucleic Acids Res. 2019 Jul 2;47(W1):W566-W570. doi: 10.1093/nar/gkz386. Nucleic Acids Res. 2019. PMID: 31106327 Free PMC article.

9

Facilitating phenotype transfer using a common data model.

Hripcsak G, Shang N, Peissig PL, Rasmussen LV, Liu C, Benoit B, Carroll RJ, Carrell DS, Denny JC, Dikilitas O, Gainer VS, Howell KM, Klann JG, Kullo IJ, Lingren T, Mentch FD, Murphy SN, Natarajan K, Pacheco JA, Wei WQ, Wiley K, Weng C. Hripcsak G, et al. Among authors: weng c. J Biomed Inform. 2019 Aug;96:103253. doi: 10.1016/j.jbi.2019.103253. Epub 2019 Jul 17. J Biomed Inform. 2019. PMID: 31325501 Free PMC article.

10

DQueST: dynamic questionnaire for search of clinical trials.

Liu C, Yuan C, Butler AM, Carvajal RD, Li ZR, Ta CN, Weng C. Liu C, et al. Among authors: weng c. J Am Med Inform Assoc. 2019 Nov 1;26(11):1333-1343. doi: 10.1093/jamia/ocz121. J Am Med Inform Assoc. 2019. PMID: 31390010 Free PMC article.

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