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108 results

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Page 1
The Tumor Profiler Study: integrated, multi-omic, functional tumor profiling for clinical decision support.
Irmisch A, Bonilla X, Chevrier S, Lehmann KV, Singer F, Toussaint NC, Esposito C, Mena J, Milani ES, Casanova R, Stekhoven DJ, Wegmann R, Jacob F, Sobottka B, Goetze S, Kuipers J, Sarabia Del Castillo J, Prummer M, Tuncel MA, Menzel U, Jacobs A, Engler S, Sivapatham S, Frei AL, Gut G, Ficek J, Miglino N; Tumor Profiler Consortium; Aebersold R, Bacac M, Beerenwinkel N, Beisel C, Bodenmiller B, Dummer R, Heinzelmann-Schwarz V, Koelzer VH, Manz MG, Moch H, Pelkmans L, Snijder B, Theocharides APA, Tolnay M, Wicki A, Wollscheid B, Rätsch G, Levesque MP. Irmisch A, et al. Among authors: pelkmans l. Cancer Cell. 2021 Mar 8;39(3):288-293. doi: 10.1016/j.ccell.2021.01.004. Epub 2021 Jan 21. Cancer Cell. 2021. PMID: 33482122 Free article.
OME-Zarr: a cloud-optimized bioimaging file format with international community support.
Moore J, Basurto-Lozada D, Besson S, Bogovic J, Bragantini J, Brown EM, Burel JM, Moreno XC, de Medeiros G, Diel EE, Gault D, Ghosh SS, Gold I, Halchenko YO, Hartley M, Horsfall D, Keller MS, Kittisopikul M, Kovacs G, Yoldaş AK, Kyoda K, de la Villegeorges ALT, Li T, Liberali P, Lindner D, Linkert M, Lüthi J, Maitin-Shepard J, Manz T, Marconato L, McCormick M, Lange M, Mohamed K, Moore W, Norlin N, Ouyang W, Özdemir B, Palla G, Pape C, Pelkmans L, Pietzsch T, Preibisch S, Prete M, Rzepka N, Samee S, Schaub N, Sidky H, Solak AC, Stirling DR, Striebel J, Tischer C, Toloudis D, Virshup I, Walczysko P, Watson AM, Weisbart E, Wong F, Yamauchi KA, Bayraktar O, Cimini BA, Gehlenborg N, Haniffa M, Hotaling N, Onami S, Royer LA, Saalfeld S, Stegle O, Theis FJ, Swedlow JR. Moore J, et al. Among authors: pelkmans l. bioRxiv [Preprint]. 2023 May 7:2023.02.17.528834. doi: 10.1101/2023.02.17.528834. bioRxiv. 2023. Update in: Histochem Cell Biol. 2023 Sep;160(3):223-251. doi: 10.1007/s00418-023-02209-1 PMID: 36865282 Free PMC article. Updated. Preprint.
CellClassifier: supervised learning of cellular phenotypes.
Rämö P, Sacher R, Snijder B, Begemann B, Pelkmans L. Rämö P, et al. Among authors: pelkmans l. Bioinformatics. 2009 Nov 15;25(22):3028-30. doi: 10.1093/bioinformatics/btp524. Epub 2009 Sep 2. Bioinformatics. 2009. PMID: 19729371
Origins of regulated cell-to-cell variability.
Snijder B, Pelkmans L. Snijder B, et al. Among authors: pelkmans l. Nat Rev Mol Cell Biol. 2011 Feb;12(2):119-25. doi: 10.1038/nrm3044. Epub 2011 Jan 12. Nat Rev Mol Cell Biol. 2011. PMID: 21224886 Review.
Towards quantitative cell biology.
Liberali P, Pelkmans L. Liberali P, et al. Among authors: pelkmans l. Nat Cell Biol. 2012 Dec;14(12):1233. doi: 10.1038/ncb2648. Nat Cell Biol. 2012. PMID: 23196839
Integrin-mediated signaling induced by simian virus 40 leads to transient uncoupling of cortical actin and the plasma membrane.
Stergiou L, Bauer M, Mair W, Bausch-Fluck D, Drayman N, Wollscheid B, Oppenheim A, Pelkmans L. Stergiou L, et al. Among authors: pelkmans l. PLoS One. 2013;8(2):e55799. doi: 10.1371/journal.pone.0055799. Epub 2013 Feb 7. PLoS One. 2013. Retraction in: PLoS One. 2025 Jan 9;20(1):e0317529. doi: 10.1371/journal.pone.0317529 PMID: 23409046 Free PMC article. Retracted.
108 results