Li XC - Search Results

1

Integrative Epigenomic Analysis of Transcriptional Regulation of Human CircRNAs.

Li XC, Tang ZD, Peng L, Li YY, Qian FC, Zhao JM, Ding LW, Du XJ, Li M, Zhang J, Bai XF, Zhu J, Feng CC, Wang QY, Pan J, Li CQ. Li XC, et al. Among authors: li yy, li cq, li m. Front Genet. 2021 Jan 25;11:590672. doi: 10.3389/fgene.2020.590672. eCollection 2020. Front Genet. 2021. PMID: 33569079 Free PMC article.

2

Characterizing and optimizing human anticancer drug targets based on topological properties in the context of biological pathways.

Zhang J, Wang Y, Shang D, Yu F, Liu W, Zhang Y, Feng C, Wang Q, Xu Y, Liu Y, Bai X, Li X, Li C. Zhang J, et al. J Biomed Inform. 2015 Apr;54:132-40. doi: 10.1016/j.jbi.2015.02.007. Epub 2015 Feb 24. J Biomed Inform. 2015. PMID: 25724580 Free article.

3

Integration of pathway structure information into a reweighted partial Cox regression approach for survival analysis on high-dimensional gene expression data.

Liu W, Wang Q, Zhao J, Zhang C, Liu Y, Zhang J, Bai X, Li X, Feng H, Liao M, Wang W, Li C. Liu W, et al. Mol Biosyst. 2015 Jul;11(7):1876-86. doi: 10.1039/c5mb00044k. Mol Biosyst. 2015. PMID: 25891149

4

Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case.

Liu W, Bai X, Liu Y, Wang W, Han J, Wang Q, Xu Y, Zhang C, Zhang S, Li X, Ren Z, Zhang J, Li C. Liu W, et al. Sci Rep. 2015 Aug 19;5:13192. doi: 10.1038/srep13192. Sci Rep. 2015. PMID: 26286638 Free PMC article.

5

RWCFusion: identifying phenotype-specific cancer driver gene fusions based on fusion pair random walk scoring method.

Zhao J, Li X, Yao Q, Li M, Zhang J, Ai B, Liu W, Wang Q, Feng C, Liu Y, Bai X, Song C, Li S, Li E, Xu L, Li C. Zhao J, et al. Oncotarget. 2016 Sep 20;7(38):61054-61068. doi: 10.18632/oncotarget.11064. Oncotarget. 2016. PMID: 27506935 Free PMC article.

6

Subpathway-CorSP: Identification of metabolic subpathways via integrating expression correlations and topological features between metabolites and genes of interest within pathways.

Feng C, Zhang J, Li X, Ai B, Han J, Wang Q, Wei T, Xu Y, Li M, Li S, Song C, Li C. Feng C, et al. Sci Rep. 2016 Sep 14;6:33262. doi: 10.1038/srep33262. Sci Rep. 2016. PMID: 27625019 Free PMC article.

7

The landscape of DNA methylation-mediated regulation of long non-coding RNAs in breast cancer.

Zhang C, Wang X, Li X, Zhao N, Wang Y, Han X, Ci C, Zhang J, Li M, Zhang Y. Zhang C, et al. Oncotarget. 2017 May 8;8(31):51134-51150. doi: 10.18632/oncotarget.17705. eCollection 2017 Aug 1. Oncotarget. 2017. PMID: 28881636 Free PMC article.

8

Identification and analysis of a key long non-coding RNAs (lncRNAs)-associated module reveal functional lncRNAs in cardiac hypertrophy.

Zhang J, Feng C, Song C, Ai B, Bai X, Liu Y, Li X, Zhao J, Shi S, Chen X, Su X, Li C. Zhang J, et al. J Cell Mol Med. 2018 Feb;22(2):892-903. doi: 10.1111/jcmm.13376. Epub 2017 Nov 20. J Cell Mol Med. 2018. PMID: 29154475 Free PMC article.

9

TRCirc: a resource for transcriptional regulation information of circRNAs.

Tang Z, Li X, Zhao J, Qian F, Feng C, Li Y, Zhang J, Jiang Y, Yang Y, Wang Q, Li C. Tang Z, et al. Brief Bioinform. 2019 Nov 27;20(6):2327-2333. doi: 10.1093/bib/bby083. Brief Bioinform. 2019. PMID: 30184150

10

SEdb: a comprehensive human super-enhancer database.

Jiang Y, Qian F, Bai X, Liu Y, Wang Q, Ai B, Han X, Shi S, Zhang J, Li X, Tang Z, Pan Q, Wang Y, Wang F, Li C. Jiang Y, et al. Nucleic Acids Res. 2019 Jan 8;47(D1):D235-D243. doi: 10.1093/nar/gky1025. Nucleic Acids Res. 2019. PMID: 30371817 Free PMC article.

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