Xu D - Search Results

1

scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses.

Wang J, Ma A, Chang Y, Gong J, Jiang Y, Qi R, Wang C, Fu H, Ma Q, Xu D. Wang J, et al. Among authors: xu d. Nat Commun. 2021 Mar 25;12(1):1882. doi: 10.1038/s41467-021-22197-x. Nat Commun. 2021. PMID: 33767197 Free PMC article.

2

Prediction of drought-resistant genes in Arabidopsis thaliana using SVM-RFE.

Liang Y, Zhang F, Wang J, Joshi T, Wang Y, Xu D. Liang Y, et al. Among authors: xu d. PLoS One. 2011;6(7):e21750. doi: 10.1371/journal.pone.0021750. Epub 2011 Jul 15. PLoS One. 2011. PMID: 21789178 Free PMC article.

3

A computational systems biology study for understanding salt tolerance mechanism in rice.

Wang J, Chen L, Wang Y, Zhang J, Liang Y, Xu D. Wang J, et al. Among authors: xu d. PLoS One. 2013 Jun 7;8(6):e64929. doi: 10.1371/journal.pone.0064929. Print 2013. PLoS One. 2013. PMID: 23762267 Free PMC article.

4

A Bayesian model for detection of high-order interactions among genetic variants in genome-wide association studies.

Wang J, Joshi T, Valliyodan B, Shi H, Liang Y, Nguyen HT, Zhang J, Xu D. Wang J, et al. Among authors: xu d. BMC Genomics. 2015 Nov 25;16:1011. doi: 10.1186/s12864-015-2217-6. BMC Genomics. 2015. PMID: 26607428 Free PMC article.

5

RDF SKETCH MAPS - KNOWLEDGE COMPLEXITY REDUCTION FOR PRECISION MEDICINE ANALYTICS.

Thanintorn N, Wang J, Ersoy I, Al-Taie Z, Jiang Y, Wang D, Verma M, Joshi T, Hammer R, Xu D, Shin D. Thanintorn N, et al. Among authors: xu d. Pac Symp Biocomput. 2016;21:417-28. Pac Symp Biocomput. 2016. PMID: 26776205 Free article.

6

Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing.

Maldonado dos Santos JV, Valliyodan B, Joshi T, Khan SM, Liu Y, Wang J, Vuong TD, de Oliveira MF, Marcelino-Guimarães FC, Xu D, Nguyen HT, Abdelnoor RV. Maldonado dos Santos JV, et al. Among authors: xu d. BMC Genomics. 2016 Feb 13;17:110. doi: 10.1186/s12864-016-2431-x. BMC Genomics. 2016. PMID: 26872939 Free PMC article.

7

Differential protein structural disturbances and suppression of assembly partners produced by nonsense GABRG2 epilepsy mutations: implications for disease phenotypic heterogeneity.

Wang J, Shen D, Xia G, Shen W, Macdonald RL, Xu D, Kang JQ. Wang J, et al. Among authors: xu d. Sci Rep. 2016 Oct 20;6:35294. doi: 10.1038/srep35294. Sci Rep. 2016. PMID: 27762395 Free PMC article.

8

PGen: large-scale genomic variations analysis workflow and browser in SoyKB.

Liu Y, Khan SM, Wang J, Rynge M, Zhang Y, Zeng S, Chen S, Maldonado Dos Santos JV, Valliyodan B, Calyam PP, Merchant N, Nguyen HT, Xu D, Joshi T. Liu Y, et al. Among authors: xu d. BMC Bioinformatics. 2016 Oct 6;17(Suppl 13):337. doi: 10.1186/s12859-016-1227-y. BMC Bioinformatics. 2016. PMID: 27766951 Free PMC article.

9

Exploring Human Diseases and Biological Mechanisms by Protein Structure Prediction and Modeling.

Wang J, Luttrell J 4th, Zhang N, Khan S, Shi N, Wang MX, Kang JQ, Wang Z, Xu D. Wang J, et al. Among authors: xu d. Adv Exp Med Biol. 2016;939:39-61. doi: 10.1007/978-981-10-1503-8_3. Adv Exp Med Biol. 2016. PMID: 27807743 Free PMC article.

10

BFDCA: A Comprehensive Tool of Using Bayes Factor for Differential Co-Expression Analysis.

Wang D, Wang J, Jiang Y, Liang Y, Xu D. Wang D, et al. Among authors: xu d. J Mol Biol. 2017 Feb 3;429(3):446-453. doi: 10.1016/j.jmb.2016.10.030. Epub 2016 Oct 27. J Mol Biol. 2017. PMID: 27984044 Free PMC article.

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