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Systematic benchmark of ancient DNA read mapping.
Oliva A, Tobler R, Cooper A, Llamas B, Souilmi Y. Oliva A, et al. Brief Bioinform. 2021 Sep 2;22(5):bbab076. doi: 10.1093/bib/bbab076. Brief Bioinform. 2021. PMID: 33834210
Additional evaluations show that specific BWA-aln settings still outperform BWA-mem for ancient DNA data alignment.
Oliva A, Tobler R, Llamas B, Souilmi Y. Oliva A, et al. Ecol Evol. 2021 Dec 17;11(24):18743-18748. doi: 10.1002/ece3.8297. eCollection 2021 Dec. Ecol Evol. 2021. PMID: 35003706 Free PMC article.
Xu et al. (2021) recently recommended a new parameterization of BWA-mem as a superior alternative to the widely-used BWA-aln algorithm to map ancient DNA sequencing data. Here, we compare the BWA-mem parameterization recommended by Xu et al. with the best-performing …
Xu et al. (2021) recently recommended a new parameterization of BWA-mem as a superior alternative to the widely-used BWA-aln a …
Reactogenicity and Immunogenicity Against MPXV of the Intradermal Administration of Modified Vaccinia Ankara Compared to the Standard Subcutaneous Route.
Mazzotta V, Piselli P, Cozzi Lepri A, Matusali G, Cimini E, Esvan R, Colavita F, Gagliardini R, Notari S, Oliva A, Meschi S, Casetti R, Micheli G, Bordi L, Giacinta A, Grassi G, Gebremeskel Tekle S, Cimaglia C, Paulicelli J, Caioli A, Gallì P, Del Duca G, Lichtner M, Sarmati L, Tamburrini E, Mastroianni C, Latini A, Faccendini P, Fontana C, Nicastri E, Siddu A, Barca A, Vaia F, Girardi E, Maggi F, Antinori A; MPOX Vaccine Lazio Study Group. Mazzotta V, et al. Among authors: oliva a. Vaccines (Basel). 2024 Dec 31;13(1):32. doi: 10.3390/vaccines13010032. Vaccines (Basel). 2024. PMID: 39852811
Essential Oils as Antimicrobials against Acinetobacter baumannii: Experimental and Literature Data to Definite Predictive Quantitative Composition-Activity Relationship Models Using Machine Learning Algorithms.
Astolfi R, Oliva A, Raffo A, Sapienza F, Ragno A, Proia E, Mastroianni CM, Luceri C, Bozovic M, Mladenovic M, Papa R, Bottoni P, Mazzinelli E, Nocca G, Ragno R. Astolfi R, et al. Among authors: oliva a. J Chem Inf Model. 2025 Jan 22. doi: 10.1021/acs.jcim.4c02389. Online ahead of print. J Chem Inf Model. 2025. PMID: 39844439
iForensic, multicentric validation of digital whole slide images (WSI) in forensic histopathology setting according to the College of American Pathologists guidelines.
Pigaiani N, Oliva A, Cirielli V, Grassi S, Arena V, Solari LM, Tatriele N, Raniero D, Brunelli M, Gobbo S, Scarpa A, Pantanowitz L, Rodegher P, Bortolotti F, Ausania F. Pigaiani N, et al. Among authors: oliva a. Int J Legal Med. 2025 Jan 21. doi: 10.1007/s00414-025-03421-5. Online ahead of print. Int J Legal Med. 2025. PMID: 39836212
1,111 results