Honardoost MA - Search Results

1

scConsensus: combining supervised and unsupervised clustering for cell type identification in single-cell RNA sequencing data.

Ranjan B, Schmidt F, Sun W, Park J, Honardoost MA, Tan J, Arul Rayan N, Prabhakar S. Ranjan B, et al. Among authors: honardoost ma. BMC Bioinformatics. 2021 Apr 12;22(1):186. doi: 10.1186/s12859-021-04028-4. BMC Bioinformatics. 2021. PMID: 33845760 Free PMC article.

2

RCA2: a scalable supervised clustering algorithm that reduces batch effects in scRNA-seq data.

Schmidt F, Ranjan B, Lin QXX, Krishnan V, Joanito I, Honardoost MA, Nawaz Z, Venkatesh PN, Tan J, Rayan NA, Ong ST, Prabhakar S. Schmidt F, et al. Among authors: honardoost ma. Nucleic Acids Res. 2021 Sep 7;49(15):8505-8519. doi: 10.1093/nar/gkab632. Nucleic Acids Res. 2021. PMID: 34320202 Free PMC article.

3

DUBStepR is a scalable correlation-based feature selection method for accurately clustering single-cell data.

Ranjan B, Sun W, Park J, Mishra K, Schmidt F, Xie R, Alipour F, Singhal V, Joanito I, Honardoost MA, Yong JMY, Koh ET, Leong KP, Rayan NA, Lim MGL, Prabhakar S. Ranjan B, et al. Among authors: honardoost ma. Nat Commun. 2021 Oct 6;12(1):5849. doi: 10.1038/s41467-021-26085-2. Nat Commun. 2021. PMID: 34615861 Free PMC article.

4

Fluctuating expression of miR-584 in primary and high-grade gastric cancer.

Ebrahimi Ghahnavieh L, Tabatabaeian H, Ebrahimi Ghahnavieh Z, Honardoost MA, Azadeh M, Moazeni Bistgani M, Ghaedi K. Ebrahimi Ghahnavieh L, et al. Among authors: honardoost ma. BMC Cancer. 2020 Jul 2;20(1):621. doi: 10.1186/s12885-020-07116-5. BMC Cancer. 2020. PMID: 32615958 Free PMC article.

5

miR-326 and miR-26a, two potential markers for diagnosis of relapse and remission phases in patient with relapsing-remitting multiple sclerosis.

Honardoost MA, Kiani-Esfahani A, Ghaedi K, Etemadifar M, Salehi M. Honardoost MA, et al. Gene. 2014 Jul 10;544(2):128-33. doi: 10.1016/j.gene.2014.04.069. Epub 2014 Apr 30. Gene. 2014. PMID: 24792898

6

Integrative computational mRNA-miRNA interaction analyses of the autoimmune-deregulated miRNAs and well-known Th17 differentiation regulators: An attempt to discover new potential miRNAs involved in Th17 differentiation.

Honardoost MA, Naghavian R, Ahmadinejad F, Hosseini A, Ghaedi K. Honardoost MA, et al. Gene. 2015 Nov 10;572(2):153-62. doi: 10.1016/j.gene.2015.08.043. Epub 2015 Aug 22. Gene. 2015. PMID: 26307197 Review.

7

ESRG, LINC00518 and PWRN1 are newly-identified deregulated lncRNAs in colorectal cancer.

Jafari N, Nasiran Najafabadi A, Hamzei B, Ataee N, Ghasemi Z, Sadeghian-Rizi T, Honardoost MA, Zamani A, Dolatabadi NF, Tabatabaeian H. Jafari N, et al. Among authors: honardoost ma. Exp Mol Pathol. 2022 Feb;124:104732. doi: 10.1016/j.yexmp.2021.104732. Epub 2021 Dec 9. Exp Mol Pathol. 2022. PMID: 34896077

8

Highly expressed TLX1NB and NPSR1-AS1 lncRNAs could serve as diagnostic tools in colorectal cancer.

Dastjerdi S, Valizadeh M, Nemati R, Honardoost MA, Dolatabadi NF, Zamani A, Tabatabaeian H. Dastjerdi S, et al. Among authors: honardoost ma. Hum Cell. 2021 Nov;34(6):1765-1774. doi: 10.1007/s13577-021-00597-x. Epub 2021 Aug 18. Hum Cell. 2021. PMID: 34406628

9

Lower expression of miR-218 in human breast cancer is associated with lymph node metastases, higher grades, and poorer prognosis.

Ahmadinejad F, Mowla SJ, Honardoost MA, Arjenaki MG, Moazeni-Bistgani M, Kheiri S, Teimori H. Ahmadinejad F, et al. Among authors: honardoost ma. Tumour Biol. 2017 Aug;39(8):1010428317698362. doi: 10.1177/1010428317698362. Tumour Biol. 2017. PMID: 28857013 Free article.

10

Aberrant expression of PlncRNA-1 and TUG1: potential biomarkers for gastric cancer diagnosis and clinically monitoring cancer progression.

Baratieh Z, Khalaj Z, Honardoost MA, Emadi-Baygi M, Khanahmad H, Salehi M, Nikpour P. Baratieh Z, et al. Among authors: honardoost ma. Biomark Med. 2017 Dec;11(12):1077-1090. doi: 10.2217/bmm-2017-0090. Epub 2017 Nov 28. Biomark Med. 2017. PMID: 29182008

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