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The rise and fall of pneumococcal serotypes carried in the PCV era.
Devine VT, Cleary DW, Jefferies JM, Anderson R, Morris DE, Tuck AC, Gladstone RA, O'Doherty G, Kuruparan P, Bentley SD, Faust SN, Clarke SC. Devine VT, et al. Among authors: anderson r. Vaccine. 2017 Mar 1;35(9):1293-1298. doi: 10.1016/j.vaccine.2017.01.035. Epub 2017 Feb 1. Vaccine. 2017. PMID: 28161425
Ecology and diversity in upper respiratory tract microbial population structures from a cross-sectional community swabbing study.
Coughtrie AL, Morris DE, Anderson R, Begum N, Cleary DW, Faust SN, Jefferies JM, Kraaijeveld AR, Moore MV, Mullee MA, Roderick PJ, Tuck A, Whittaker RN, Yuen HM, Doncaster CP, Clarke SC. Coughtrie AL, et al. Among authors: anderson r. J Med Microbiol. 2018 Aug;67(8):1096-1108. doi: 10.1099/jmm.0.000773. Epub 2018 Jun 21. J Med Microbiol. 2018. PMID: 29927372
Impact of radiologically stratified exacerbations: insights into pneumonia aetiology in COPD.
Williams NP, Ostridge K, Devaster JM, Kim V, Coombs NA, Bourne S, Clarke SC, Harden S, Abbas A, Aris E, Lambert C, Tuck A, Williams A, Wootton S, Staples KJ, Wilkinson TMA; AERIS Study Group. Williams NP, et al. Respir Res. 2018 Jul 28;19(1):143. doi: 10.1186/s12931-018-0842-8. Respir Res. 2018. PMID: 30055608 Free PMC article. Clinical Trial.
The upper respiratory tract microbiome of indigenous Orang Asli in north-eastern Peninsular Malaysia.
Cleary DW, Morris DE, Anderson RA, Jones J, Alattraqchi AG, A Rahman NI, Ismail S, Razali MS, Mohd Amin R, Abd Aziz A, Esa NK, Amiruddin S, Chew CH, Simin H, Abdullah R, Yeo CC, Clarke SC. Cleary DW, et al. Among authors: anderson ra. NPJ Biofilms Microbiomes. 2021 Jan 5;7(1):1. doi: 10.1038/s41522-020-00173-5. NPJ Biofilms Microbiomes. 2021. PMID: 33402693 Free PMC article.
Impact of bacterial strain acquisition in the lung of patients with COPD: the AERIS study.
Malvisi L, Yarraguntla A, Mortier MC, Osman K, Cleary DW, Sente B, Pascal TG, Weynants V, Clarke SC, Taddei L, Wilkinson TMA, Devaster JM, Devos N; AERIS Study Group. Malvisi L, et al. Infect Dis (Lond). 2022 Nov;54(11):784-793. doi: 10.1080/23744235.2022.2092648. Epub 2022 Jul 6. Infect Dis (Lond). 2022. PMID: 35794793 Free article.
Longitudinal profiling of the lung microbiome in the AERIS study demonstrates repeatability of bacterial and eosinophilic COPD exacerbations.
Mayhew D, Devos N, Lambert C, Brown JR, Clarke SC, Kim VL, Magid-Slav M, Miller BE, Ostridge KK, Patel R, Sathe G, Simola DF, Staples KJ, Sung R, Tal-Singer R, Tuck AC, Van Horn S, Weynants V, Williams NP, Devaster JM, Wilkinson TMA; AERIS Study Group. Mayhew D, et al. Thorax. 2018 May;73(5):422-430. doi: 10.1136/thoraxjnl-2017-210408. Epub 2018 Jan 31. Thorax. 2018. PMID: 29386298 Free PMC article.
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