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Challenges in benchmarking metagenomic profilers.
Sun Z, Huang S, Zhang M, Zhu Q, Haiminen N, Carrieri AP, Vázquez-Baeza Y, Parida L, Kim HC, Knight R, Liu YY. Sun Z, et al. Among authors: parida l. Nat Methods. 2021 Jun;18(6):618-626. doi: 10.1038/s41592-021-01141-3. Epub 2021 May 13. Nat Methods. 2021. PMID: 33986544 Free PMC article.
Discovering patterns in gene order.
Parida L, Haiminen N. Parida L, et al. Methods Mol Biol. 2012;855:431-55. doi: 10.1007/978-1-61779-582-4_16. Methods Mol Biol. 2012. PMID: 22407719 Review.
iXora: exact haplotype inferencing and trait association.
Utro F, Haiminen N, Livingstone D 3rd, Cornejo OE, Royaert S, Schnell RJ, Motamayor JC, Kuhn DN, Parida L. Utro F, et al. Among authors: parida l. BMC Genet. 2013 Jun 6;14:48. doi: 10.1186/1471-2156-14-48. BMC Genet. 2013. PMID: 23742238 Free PMC article.
BAC sequencing using pooled methods.
Saski CA, Feltus FA, Parida L, Haiminen N. Saski CA, et al. Among authors: parida l. Methods Mol Biol. 2015;1227:55-67. doi: 10.1007/978-1-4939-1652-8_3. Methods Mol Biol. 2015. PMID: 25239741
188 results