Goesmann A - Search Results

1

EDGAR3.0: comparative genomics and phylogenomics on a scalable infrastructure.

Dieckmann MA, Beyvers S, Nkouamedjo-Fankep RC, Hanel PHG, Jelonek L, Blom J, Goesmann A. Dieckmann MA, et al. Among authors: goesmann a. Nucleic Acids Res. 2021 Jul 2;49(W1):W185-W192. doi: 10.1093/nar/gkab341. Nucleic Acids Res. 2021. PMID: 33988716 Free PMC article.

2

EDGAR: a software framework for the comparative analysis of prokaryotic genomes.

Blom J, Albaum SP, Doppmeier D, Pühler A, Vorhölter FJ, Zakrzewski M, Goesmann A. Blom J, et al. Among authors: goesmann a. BMC Bioinformatics. 2009 May 20;10:154. doi: 10.1186/1471-2105-10-154. BMC Bioinformatics. 2009. PMID: 19457249 Free PMC article.

3

Comparative genome biology of a serogroup B carriage and disease strain supports a polygenic nature of meningococcal virulence.

Joseph B, Schneiker-Bekel S, Schramm-Glück A, Blom J, Claus H, Linke B, Schwarz RF, Becker A, Goesmann A, Frosch M, Schoen C. Joseph B, et al. Among authors: goesmann a. J Bacteriol. 2010 Oct;192(20):5363-77. doi: 10.1128/JB.00883-10. Epub 2010 Aug 13. J Bacteriol. 2010. PMID: 20709895 Free PMC article.

4

CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks.

Schneider J, Vorhölter FJ, Trost E, Blom J, Musa YR, Neuweger H, Niehaus K, Schatschneider S, Tauch A, Goesmann A. Schneider J, et al. Among authors: goesmann a. Genet Mol Res. 2010 Aug 24;9(3):1660-72. doi: 10.4238/vol9-3gmr901. Genet Mol Res. 2010. PMID: 20799163 Free article.

5

RAPYD--rapid annotation platform for yeast data.

Schneider J, Blom J, Jaenicke S, Linke B, Brinkrolf K, Neuweger H, Tauch A, Goesmann A. Schneider J, et al. Among authors: goesmann a. J Biotechnol. 2011 Aug 20;155(1):118-26. doi: 10.1016/j.jbiotec.2010.10.076. Epub 2010 Oct 30. J Biotechnol. 2011. PMID: 21040748

6

RhizoRegNet--a database of rhizobial transcription factors and regulatory networks.

Krol E, Blom J, Winnebald J, Berhörster A, Barnett MJ, Goesmann A, Baumbach J, Becker A. Krol E, et al. Among authors: goesmann a. J Biotechnol. 2011 Aug 20;155(1):127-34. doi: 10.1016/j.jbiotec.2010.11.004. Epub 2010 Nov 16. J Biotechnol. 2011. PMID: 21087643

7

Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.

Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Sczcepanowski R, Goesmann A, Setubal JC, Schmitt R, Pühler A, Schlüter A. Wibberg D, et al. Among authors: goesmann a. J Biotechnol. 2011 Aug 20;155(1):50-62. doi: 10.1016/j.jbiotec.2011.01.010. Epub 2011 Feb 15. J Biotechnol. 2011. PMID: 21329740

8

The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome.

Schneiker-Bekel S, Wibberg D, Bekel T, Blom J, Linke B, Neuweger H, Stiens M, Vorhölter FJ, Weidner S, Goesmann A, Pühler A, Schlüter A. Schneiker-Bekel S, et al. Among authors: goesmann a. J Biotechnol. 2011 Aug 20;155(1):20-33. doi: 10.1016/j.jbiotec.2010.12.018. Epub 2011 Mar 17. J Biotechnol. 2011. PMID: 21396969

9

Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming.

Blom J, Jakobi T, Doppmeier D, Jaenicke S, Kalinowski J, Stoye J, Goesmann A. Blom J, et al. Among authors: goesmann a. Bioinformatics. 2011 May 15;27(10):1351-8. doi: 10.1093/bioinformatics/btr151. Epub 2011 Mar 30. Bioinformatics. 2011. PMID: 21450712

10

Virulence evolution of the human pathogen Neisseria meningitidis by recombination in the core and accessory genome.

Joseph B, Schwarz RF, Linke B, Blom J, Becker A, Claus H, Goesmann A, Frosch M, Müller T, Vogel U, Schoen C. Joseph B, et al. Among authors: goesmann a. PLoS One. 2011 Apr 26;6(4):e18441. doi: 10.1371/journal.pone.0018441. PLoS One. 2011. PMID: 21541312 Free PMC article.

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