Emery S - Search Results

1

Dog10K_Boxer_Tasha_1.0: A Long-Read Assembly of the Dog Reference Genome.

Jagannathan V, Hitte C, Kidd JM, Masterson P, Murphy TD, Emery S, Davis B, Buckley RM, Liu YH, Zhang XQ, Leeb T, Zhang YP, Ostrander EA, Wang GD. Jagannathan V, et al. Among authors: emery s. Genes (Basel). 2021 May 30;12(6):847. doi: 10.3390/genes12060847. Genes (Basel). 2021. PMID: 34070911 Free PMC article.

2

Long-read assembly of a Great Dane genome highlights the contribution of GC-rich sequence and mobile elements to canine genomes.

Halo JV, Pendleton AL, Shen F, Doucet AJ, Derrien T, Hitte C, Kirby LE, Myers B, Sliwerska E, Emery S, Moran JV, Boyko AR, Kidd JM. Halo JV, et al. Among authors: emery s. Proc Natl Acad Sci U S A. 2021 Mar 16;118(11):e2016274118. doi: 10.1073/pnas.2016274118. Proc Natl Acad Sci U S A. 2021. PMID: 33836575 Free PMC article.

3

Modeling Human Population Separation History Using Physically Phased Genomes.

Song S, Sliwerska E, Emery S, Kidd JM. Song S, et al. Among authors: emery s. Genetics. 2017 Jan;205(1):385-395. doi: 10.1534/genetics.116.192963. Epub 2016 Nov 9. Genetics. 2017. PMID: 28049708 Free PMC article.

4

Comparison of village dog and wolf genomes highlights the role of the neural crest in dog domestication.

Pendleton AL, Shen F, Taravella AM, Emery S, Veeramah KR, Boyko AR, Kidd JM. Pendleton AL, et al. Among authors: emery s. BMC Biol. 2018 Jun 28;16(1):64. doi: 10.1186/s12915-018-0535-2. BMC Biol. 2018. PMID: 29950181 Free PMC article.

5

The genomic landscape of polymorphic human nuclear mitochondrial insertions.

Dayama G, Emery SB, Kidd JM, Mills RE. Dayama G, et al. Nucleic Acids Res. 2014 Nov 10;42(20):12640-9. doi: 10.1093/nar/gku1038. Epub 2014 Oct 27. Nucleic Acids Res. 2014. PMID: 25348406 Free PMC article.

6

Identification and characterization of occult human-specific LINE-1 insertions using long-read sequencing technology.

Zhou W, Emery SB, Flasch DA, Wang Y, Kwan KY, Kidd JM, Moran JV, Mills RE. Zhou W, et al. Nucleic Acids Res. 2020 Feb 20;48(3):1146-1163. doi: 10.1093/nar/gkz1173. Nucleic Acids Res. 2020. PMID: 31853540 Free PMC article.

7

Resolving complex structural genomic rearrangements using a randomized approach.

Zhao X, Emery SB, Myers B, Kidd JM, Mills RE. Zhao X, et al. Genome Biol. 2016 Jun 10;17(1):126. doi: 10.1186/s13059-016-0993-1. Genome Biol. 2016. PMID: 27287201 Free PMC article.

8

Y-Chromosome Structural Diversity in the Bonobo and Chimpanzee Lineages.

Oetjens MT, Shen F, Emery SB, Zou Z, Kidd JM. Oetjens MT, et al. Genome Biol Evol. 2016 Aug 3;8(7):2231-40. doi: 10.1093/gbe/evw150. Genome Biol Evol. 2016. PMID: 27358426 Free PMC article.

9

Bimodal Expression Patterns, and Not Viral Burst Sizes, Predict the Effects of Vpr on HIV-1 Proviral Populations in Jurkat Cells.

Atindaana E, Kissi-Twum A, Emery S, Burnett C, Pitcher J, Visser M, Kidd JM, Telesnitsky A. Atindaana E, et al. Among authors: emery s. mBio. 2022 Apr 26;13(2):e0374821. doi: 10.1128/mbio.03748-21. Epub 2022 Apr 6. mBio. 2022. PMID: 35384697 Free PMC article.

10

Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia.

Zhu X, Zhou B, Pattni R, Gleason K, Tan C, Kalinowski A, Sloan S, Fiston-Lavier AS, Mariani J, Petrov D, Barres BA, Duncan L, Abyzov A, Vogel H; Brain Somatic Mosaicism Network; Moran JV, Vaccarino FM, Tamminga CA, Levinson DF, Urban AE. Zhu X, et al. Nat Neurosci. 2021 Feb;24(2):186-196. doi: 10.1038/s41593-020-00767-4. Epub 2021 Jan 11. Nat Neurosci. 2021. PMID: 33432196 Free PMC article.

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