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Draft Genome Assemblies and Annotations of Agrypnia vestita Walker, and Hesperophylax magnus Banks Reveal Substantial Repetitive Element Expansion in Tube Case-Making Caddisflies (Insecta: Trichoptera).
Olsen LK, Heckenhauer J, Sproul JS, Dikow RB, Gonzalez VL, Kweskin MP, Taylor AM, Wilson SB, Stewart RJ, Zhou X, Holzenthal R, Pauls SU, Frandsen PB. Olsen LK, et al. Among authors: heckenhauer j. Genome Biol Evol. 2021 Mar 1;13(3):evab013. doi: 10.1093/gbe/evab013. Genome Biol Evol. 2021. PMID: 33501983 Free PMC article.
Long Reads Are Revolutionizing 20 Years of Insect Genome Sequencing.
Hotaling S, Sproul JS, Heckenhauer J, Powell A, Larracuente AM, Pauls SU, Kelley JL, Frandsen PB. Hotaling S, et al. Among authors: heckenhauer j. Genome Biol Evol. 2021 Aug 3;13(8):evab138. doi: 10.1093/gbe/evab138. Genome Biol Evol. 2021. PMID: 34152413 Free PMC article.
Genome size evolution in the diverse insect order Trichoptera.
Heckenhauer J, Frandsen PB, Sproul JS, Li Z, Paule J, Larracuente AM, Maughan PJ, Barker MS, Schneider JV, Stewart RJ, Pauls SU. Heckenhauer J, et al. Gigascience. 2022 Feb 25;11:giac011. doi: 10.1093/gigascience/giac011. Gigascience. 2022. PMID: 35217860 Free PMC article.
The impact of sequencing depth and relatedness of the reference genome in population genomic studies: A case study with two caddisfly species (Trichoptera, Rhyacophilidae, Himalopsyche).
Deng XL, Frandsen PB, Dikow RB, Favre A, Shah DN, Shah RDT, Schneider JV, Heckenhauer J, Pauls SU. Deng XL, et al. Among authors: heckenhauer j. Ecol Evol. 2022 Dec 12;12(12):e9583. doi: 10.1002/ece3.9583. eCollection 2022 Dec. Ecol Evol. 2022. PMID: 36523526 Free PMC article.
Long-read HiFi sequencing correctly assembles repetitive heavy fibroin silk genes in new moth and caddisfly genomes.
Kawahara AY, Storer CG, Markee A, Heckenhauer J, Powell A, Plotkin D, Hotaling S, Cleland TP, Dikow RB, Dikow T, Kuranishi RB, Messcher R, Pauls SU, Stewart RJ, Tojo K, Frandsen PB. Kawahara AY, et al. Among authors: heckenhauer j. GigaByte. 2022 Jun 30;2022:gigabyte64. doi: 10.46471/gigabyte.64. eCollection 2022. GigaByte. 2022. PMID: 36824508 Free PMC article.
23 results