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MEA-NAP compares microscale functional connectivity, topology, and network dynamics in organoid or monolayer neuronal cultures.
Sit TP, Feord RC, Dunn AW, Chabros J, Oluigbo D, Smith HH, Burn L, Chang E, Boschi A, Yuan Y, Gibbons GM, Khayat-Khoei M, De Angelis F, Hemberg E, Hemberg M, Lancaster MA, Lakatos A, Eglen SJ, Paulsen O, Mierau SB. Sit TP, et al. bioRxiv [Preprint]. 2024 Apr 11:2024.02.05.578738. doi: 10.1101/2024.02.05.578738. bioRxiv. 2024. Update in: Cell Rep Methods. 2024 Nov 18;4(11):100901. doi: 10.1016/j.crmeth.2024.100901 PMID: 38370637 Free PMC article. Updated. Preprint.
MEA-NAP: A flexible network analysis pipeline for neuronal 2D and 3D organoid multielectrode recordings.
Sit TPH, Feord RC, Dunn AWE, Chabros J, Oluigbo D, Smith HH, Burn L, Chang E, Boschi A, Yuan Y, Gibbons GM, Khayat-Khoei M, De Angelis F, Hemberg E, Hemberg M, Lancaster MA, Lakatos A, Eglen SJ, Paulsen O, Mierau SB. Sit TPH, et al. Among authors: dunn awe. Cell Rep Methods. 2024 Nov 18;4(11):100901. doi: 10.1016/j.crmeth.2024.100901. Epub 2024 Nov 8. Cell Rep Methods. 2024. PMID: 39520988 Free article.
Oscillatory cortical forces promote three dimensional cell intercalations that shape the murine mandibular arch.
Tao H, Zhu M, Lau K, Whitley OKW, Samani M, Xiao X, Chen XX, Hahn NA, Liu W, Valencia M, Wu M, Wang X, Fenelon KD, Pasiliao CC, Hu D, Wu J, Spring S, Ferguson J, Karuna EP, Henkelman RM, Dunn A, Huang H, Ho HH, Atit R, Goyal S, Sun Y, Hopyan S. Tao H, et al. Nat Commun. 2019 Apr 12;10(1):1703. doi: 10.1038/s41467-019-09540-z. Nat Commun. 2019. PMID: 30979871 Free PMC article.