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SquiggleNet: real-time, direct classification of nanopore signals.
Bao Y, Wadden J, Erb-Downward JR, Ranjan P, Zhou W, McDonald TL, Mills RE, Boyle AP, Dickson RP, Blaauw D, Welch JD. Bao Y, et al. Among authors: mcdonald tl. Genome Biol. 2021 Oct 27;22(1):298. doi: 10.1186/s13059-021-02511-y. Genome Biol. 2021. PMID: 34706748 Free PMC article.
Multiplexed long-read plasmid validation and analysis using OnRamp.
Mumm C, Drexel ML, McDonald TL, Diehl AG, Switzenberg JA, Boyle AP. Mumm C, et al. Among authors: mcdonald tl. Genome Res. 2023 May;33(5):741-749. doi: 10.1101/gr.277369.122. Epub 2023 May 8. Genome Res. 2023. PMID: 37156622 Free PMC article.
A personalized multi-platform assessment of somatic mosaicism in the human frontal cortex.
Zhou W, Mumm C, Gan Y, Switzenberg JA, Wang J, De Oliveira P, Kathuria K, Losh SJ, McDonald TL, Bessell B, Van Deynze K, McConnell MJ, Boyle AP, Mills RE. Zhou W, et al. Among authors: mcdonald tl. bioRxiv [Preprint]. 2024 Dec 21:2024.12.18.629274. doi: 10.1101/2024.12.18.629274. bioRxiv. 2024. PMID: 39763954 Free PMC article. Preprint.
Range-wide sources of variation in reproductive rates of northern spotted owls.
Rockweit JT, Jenkins JM, Hines JE, Nichols JD, Dugger KM, Franklin AB, Carlson PC, Kendall WL, Lesmeister DB, McCafferty C, Ackers SH, Andrews LS, Bailey LL, Burgher J, Burnham KP, Chestnut T, Conner MM, Davis RJ, Dilione KE, Forsman ED, Glenn EM, Gremel SA, Hamm KA, Herter DR, Higley JM, Horn RB, Lamphear DW, McDonald TL, Reid JA, Schwarz CJ, Simon DC, Sovern SG, Swingle JK, Wiens JD, Wise H, Yackulic CB. Rockweit JT, et al. Among authors: mcdonald tl. Ecol Appl. 2023 Jan;33(1):e2726. doi: 10.1002/eap.2726. Epub 2022 Nov 30. Ecol Appl. 2023. PMID: 36053865 Free PMC article.
Invader removal triggers competitive release in a threatened avian predator.
Wiens JD, Dugger KM, Higley JM, Lesmeister DB, Franklin AB, Hamm KA, White GC, Dilione KE, Simon DC, Bown RR, Carlson PC, Yackulic CB, Nichols JD, Hines JE, Davis RJ, Lamphear DW, McCafferty C, McDonald TL, Sovern SG. Wiens JD, et al. Among authors: mcdonald tl. Proc Natl Acad Sci U S A. 2021 Aug 3;118(31):e2102859118. doi: 10.1073/pnas.2102859118. Proc Natl Acad Sci U S A. 2021. PMID: 34282032 Free PMC article.
94 results