Coudray N - Search Results

1

Deep Learning and Pathomics Analyses Reveal Cell Nuclei as Important Features for Mutation Prediction of BRAF-Mutated Melanomas.

Kim RH, Nomikou S, Coudray N, Jour G, Dawood Z, Hong R, Esteva E, Sakellaropoulos T, Donnelly D, Moran U, Hatzimemos A, Weber JS, Razavian N, Aifantis I, Fenyo D, Snuderl M, Shapiro R, Berman RS, Osman I, Tsirigos A. Kim RH, et al. Among authors: coudray n. J Invest Dermatol. 2022 Jun;142(6):1650-1658.e6. doi: 10.1016/j.jid.2021.09.034. Epub 2021 Oct 30. J Invest Dermatol. 2022. PMID: 34757067 Free PMC article.

2

Classification and mutation prediction from non-small cell lung cancer histopathology images using deep learning.

Coudray N, Ocampo PS, Sakellaropoulos T, Narula N, Snuderl M, Fenyö D, Moreira AL, Razavian N, Tsirigos A. Coudray N, et al. Nat Med. 2018 Oct;24(10):1559-1567. doi: 10.1038/s41591-018-0177-5. Epub 2018 Sep 17. Nat Med. 2018. PMID: 30224757 Free PMC article.

3

Using Machine Learning Algorithms to Predict Immunotherapy Response in Patients with Advanced Melanoma.

Johannet P, Coudray N, Donnelly DM, Jour G, Illa-Bochaca I, Xia Y, Johnson DB, Wheless L, Patrinely JR, Nomikou S, Rimm DL, Pavlick AC, Weber JS, Zhong J, Tsirigos A, Osman I. Johannet P, et al. Among authors: coudray n. Clin Cancer Res. 2021 Jan 1;27(1):131-140. doi: 10.1158/1078-0432.CCR-20-2415. Epub 2020 Nov 18. Clin Cancer Res. 2021. PMID: 33208341 Free PMC article.

4

HEAL: an automated deep learning framework for cancer histopathology image analysis.

Wang Y, Coudray N, Zhao Y, Li F, Hu C, Zhang YZ, Imoto S, Tsirigos A, Webb GI, Daly RJ, Song J. Wang Y, et al. Among authors: coudray n. Bioinformatics. 2021 Nov 18;37(22):4291-4295. doi: 10.1093/bioinformatics/btab380. Bioinformatics. 2021. PMID: 34009289

5

Deep learning links histology, molecular signatures and prognosis in cancer.

Coudray N, Tsirigos A. Coudray N, et al. Nat Cancer. 2020 Aug;1(8):755-757. doi: 10.1038/s43018-020-0099-2. Nat Cancer. 2020. PMID: 35122048 Free PMC article.

6

Quantitative and Morphology-Based Deep Convolutional Neural Network Approaches for Osteosarcoma Survival Prediction in the Neoadjuvant and Metastatic Setting.

Coudray N, Occidental MA, Mantilla JG, Claudio Quiros A, Yuan K, Balko J, Tsirigos A, Jour G. Coudray N, et al. Clin Cancer Res. 2024 Nov 19. doi: 10.1158/1078-0432.CCR-24-2599. Online ahead of print. Clin Cancer Res. 2024. PMID: 39561274

7

Structure of the radial spoke head and insights into its role in mechanoregulation of ciliary beating.

Grossman-Haham I, Coudray N, Yu Z, Wang F, Zhang N, Bhabha G, Vale RD. Grossman-Haham I, et al. Among authors: coudray n. Nat Struct Mol Biol. 2021 Jan;28(1):20-28. doi: 10.1038/s41594-020-00519-9. Epub 2020 Dec 14. Nat Struct Mol Biol. 2021. PMID: 33318704 Free PMC article.

8

Role of Ring6 in the Function of the E. coli MCE Protein LetB.

Vieni C, Coudray N, Isom GL, Bhabha G, Ekiert DC. Vieni C, et al. Among authors: coudray n. J Mol Biol. 2022 Apr 15;434(7):167463. doi: 10.1016/j.jmb.2022.167463. Epub 2022 Jan 22. J Mol Biol. 2022. PMID: 35077766 Free PMC article.

9

Coupling of ATPase activity, microtubule binding, and mechanics in the dynein motor domain.

Niekamp S, Coudray N, Zhang N, Vale RD, Bhabha G. Niekamp S, et al. Among authors: coudray n. EMBO J. 2019 Jul 1;38(13):e101414. doi: 10.15252/embj.2018101414. Epub 2019 May 31. EMBO J. 2019. PMID: 31268607 Free PMC article.

10

Protein-protein interactions in the Mla lipid transport system probed by computational structure prediction and deep mutational scanning.

MacRae MR, Puvanendran D, Haase MAB, Coudray N, Kolich L, Lam C, Baek M, Bhabha G, Ekiert DC. MacRae MR, et al. Among authors: coudray n. J Biol Chem. 2023 Jun;299(6):104744. doi: 10.1016/j.jbc.2023.104744. Epub 2023 Apr 25. J Biol Chem. 2023. PMID: 37100290 Free PMC article.

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