Gillam EMJ - Search Results

1

Using the Evolutionary History of Proteins to Engineer Insertion-Deletion Mutants from Robust, Ancestral Templates Using Graphical Representation of Ancestral Sequence Predictions (GRASP).

Ross CM, Foley G, Boden M, Gillam EMJ. Ross CM, et al. Among authors: gillam emj. Methods Mol Biol. 2022;2397:85-110. doi: 10.1007/978-1-0716-1826-4_6. Methods Mol Biol. 2022. PMID: 34813061

2

In silico characterization of protein chimeras: relating sequence and function within the same fold.

Buske FA, Their R, Gillam EM, Bodén M. Buske FA, et al. Proteins. 2009 Oct;77(1):111-20. doi: 10.1002/prot.22422. Proteins. 2009. PMID: 19415757

3

Restriction enzyme-mediated DNA family shuffling.

Behrendorff JB, Johnston WA, Gillam EM. Behrendorff JB, et al. Methods Mol Biol. 2014;1179:175-87. doi: 10.1007/978-1-4939-1053-3_12. Methods Mol Biol. 2014. PMID: 25055778

4

Computational tools for directed evolution: a comparison of prospective and retrospective strategies.

Zaugg J, Gumulya Y, Gillam EM, Bodén M. Zaugg J, et al. Methods Mol Biol. 2014;1179:315-33. doi: 10.1007/978-1-4939-1053-3_21. Methods Mol Biol. 2014. PMID: 25055787 Review.

5

ReX: A suite of computational tools for the design, visualization, and analysis of chimeric protein libraries.

Huang W, Johnston WA, Boden M, Gillam EM. Huang W, et al. Biotechniques. 2016 Feb 1;60(2):91-4. doi: 10.2144/000114381. eCollection 2016 Feb. Biotechniques. 2016. PMID: 26842355 Free article.

6

Exploring the past and the future of protein evolution with ancestral sequence reconstruction: the 'retro' approach to protein engineering.

Gumulya Y, Gillam EM. Gumulya Y, et al. Biochem J. 2017 Jan 1;474(1):1-19. doi: 10.1042/BCJ20160507. Biochem J. 2017. PMID: 28008088 Review.

7

The GMC superfamily of oxidoreductases revisited: analysis and evolution of fungal GMC oxidoreductases.

Sützl L, Foley G, Gillam EMJ, Bodén M, Haltrich D. Sützl L, et al. Among authors: gillam emj. Biotechnol Biofuels. 2019 May 10;12:118. doi: 10.1186/s13068-019-1457-0. eCollection 2019. Biotechnol Biofuels. 2019. PMID: 31168323 Free PMC article.

8

SeqScrub: a web tool for automatic cleaning and annotation of FASTA file headers for bioinformatic applications.

Foley G, Sützl L, D'Cunha SA, Gillam EM, Bodén M. Foley G, et al. Biotechniques. 2019 Aug;67(2):50-54. doi: 10.2144/btn-2018-0188. Epub 2019 Jun 20. Biotechniques. 2019. PMID: 31218882 Free article.

9

Ancestral Sequence Reconstruction of a Cytochrome P450 Family Involved in Chemical Defense Reveals the Functional Evolution of a Promiscuous, Xenobiotic-Metabolizing Enzyme in Vertebrates.

Harris KL, Thomson RES, Gumulya Y, Foley G, Carrera-Pacheco SE, Syed P, Janosik T, Sandinge AS, Andersson S, Jurva U, Bodén M, Gillam EMJ. Harris KL, et al. Among authors: gillam emj. Mol Biol Evol. 2022 Jun 2;39(6):msac116. doi: 10.1093/molbev/msac116. Mol Biol Evol. 2022. PMID: 35639613 Free PMC article.

10

DNA shuffling of cytochrome P450 enzymes.

Behrendorff JB, Johnston WA, Gillam EM. Behrendorff JB, et al. Methods Mol Biol. 2013;987:177-88. doi: 10.1007/978-1-62703-321-3_16. Methods Mol Biol. 2013. PMID: 23475678

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