Tran NH - Search Results

1

A tale of solving two computational challenges in protein science: neoantigen prediction and protein structure prediction.

Tran NH, Xu J, Li M. Tran NH, et al. Brief Bioinform. 2022 Jan 17;23(1):bbab493. doi: 10.1093/bib/bbab493. Brief Bioinform. 2022. PMID: 34891158 Free PMC article. Review.

2

Complete De Novo Assembly of Monoclonal Antibody Sequences.

Tran NH, Rahman MZ, He L, Xin L, Shan B, Li M. Tran NH, et al. Sci Rep. 2016 Aug 26;6:31730. doi: 10.1038/srep31730. Sci Rep. 2016. PMID: 27562653 Free PMC article.

3

De novo peptide sequencing by deep learning.

Tran NH, Zhang X, Xin L, Shan B, Li M. Tran NH, et al. Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):8247-8252. doi: 10.1073/pnas.1705691114. Epub 2017 Jul 18. Proc Natl Acad Sci U S A. 2017. PMID: 28720701 Free PMC article.

4

Deep Omics.

Tran NH, Zhang X, Li M. Tran NH, et al. Proteomics. 2018 Jan;18(2). doi: 10.1002/pmic.201700319. Epub 2017 Dec 29. Proteomics. 2018. PMID: 29239117

5

Deep learning enables de novo peptide sequencing from data-independent-acquisition mass spectrometry.

Tran NH, Qiao R, Xin L, Chen X, Liu C, Zhang X, Shan B, Ghodsi A, Li M. Tran NH, et al. Nat Methods. 2019 Jan;16(1):63-66. doi: 10.1038/s41592-018-0260-3. Epub 2018 Dec 20. Nat Methods. 2019. PMID: 30573815

6

DeepIso: A Deep Learning Model for Peptide Feature Detection from LC-MS map.

Zohora FT, Rahman MZ, Tran NH, Xin L, Shan B, Li M. Zohora FT, et al. Among authors: tran nh. Sci Rep. 2019 Nov 20;9(1):17168. doi: 10.1038/s41598-019-52954-4. Sci Rep. 2019. PMID: 31748623 Free PMC article.

7

Deep neural network for detecting arbitrary precision peptide features through attention based segmentation.

Zohora FT, Rahman MZ, Tran NH, Xin L, Shan B, Li M. Zohora FT, et al. Among authors: tran nh. Sci Rep. 2021 Sep 14;11(1):18249. doi: 10.1038/s41598-021-97669-7. Sci Rep. 2021. PMID: 34521906 Free PMC article.

8

Glycopeptide database search and de novo sequencing with PEAKS GlycanFinder enable highly sensitive glycoproteomics.

Sun W, Zhang Q, Zhang X, Tran NH, Ziaur Rahman M, Chen Z, Peng C, Ma J, Li M, Xin L, Shan B. Sun W, et al. Among authors: tran nh. Nat Commun. 2023 Jul 8;14(1):4046. doi: 10.1038/s41467-023-39699-5. Nat Commun. 2023. PMID: 37422459 Free PMC article.

9

Author Correction: Glycopeptide database search and de novo sequencing with PEAKS GlycanFinder enable highly sensitive glycoproteomics.

Sun W, Zhang Q, Zhang X, Tran NH, Ziaur Rahman M, Chen Z, Peng C, Ma J, Li M, Xin L, Shan B. Sun W, et al. Among authors: tran nh. Nat Commun. 2024 Jan 24;15(1):701. doi: 10.1038/s41467-024-45153-x. Nat Commun. 2024. PMID: 38267455 Free PMC article. No abstract available.

10

NovoBoard: A Comprehensive Framework for Evaluating the False Discovery Rate and Accuracy of De Novo Peptide Sequencing.

Tran NH, Qiao R, Mao Z, Pan S, Zhang Q, Li W, Xin L, Li M, Shan B. Tran NH, et al. Mol Cell Proteomics. 2024 Nov;23(11):100849. doi: 10.1016/j.mcpro.2024.100849. Epub 2024 Sep 24. Mol Cell Proteomics. 2024. PMID: 39321875 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

241 results

Search Page

Filters