Vermeesch J - Search Results

1

Systematic evaluation of NIPT aneuploidy detection software tools with clinically validated NIPT samples.

Paluoja P, Teder H, Ardeshirdavani A, Bayindir B, Vermeesch J, Salumets A, Krjutškov K, Palta P. Paluoja P, et al. Among authors: vermeesch j. PLoS Comput Biol. 2021 Dec 20;17(12):e1009684. doi: 10.1371/journal.pcbi.1009684. eCollection 2021 Dec. PLoS Comput Biol. 2021. PMID: 34928946 Free PMC article.

2

eXtasy: variant prioritization by genomic data fusion.

Sifrim A, Popovic D, Tranchevent LC, Ardeshirdavani A, Sakai R, Konings P, Vermeesch JR, Aerts J, De Moor B, Moreau Y. Sifrim A, et al. Among authors: vermeesch jr. Nat Methods. 2013 Nov;10(11):1083-4. doi: 10.1038/nmeth.2656. Epub 2013 Sep 29. Nat Methods. 2013. PMID: 24076761 Free article.

3

NGS-Logistics: federated analysis of NGS sequence variants across multiple locations.

Ardeshirdavani A, Souche E, Dehaspe L, Van Houdt J, Vermeesch JR, Moreau Y. Ardeshirdavani A, et al. Among authors: vermeesch jr. Genome Med. 2014 Sep 17;6(9):71. doi: 10.1186/s13073-014-0071-9. eCollection 2014. Genome Med. 2014. PMID: 25328540 Free PMC article.

4

Noninvasive prenatal testing using a novel analysis pipeline to screen for all autosomal fetal aneuploidies improves pregnancy management.

Bayindir B, Dehaspe L, Brison N, Brady P, Ardui S, Kammoun M, Van der Veken L, Lichtenbelt K, Van den Bogaert K, Van Houdt J, Peeters H, Van Esch H, de Ravel T, Legius E, Devriendt K, Vermeesch JR. Bayindir B, et al. Among authors: vermeesch jr. Eur J Hum Genet. 2015 Oct;23(10):1286-93. doi: 10.1038/ejhg.2014.282. Epub 2015 Jan 14. Eur J Hum Genet. 2015. PMID: 25585704 Free PMC article.

5

Clinical implementation of NIPT - technical and biological challenges.

Brady P, Brison N, Van Den Bogaert K, de Ravel T, Peeters H, Van Esch H, Devriendt K, Legius E, Vermeesch JR. Brady P, et al. Among authors: vermeesch jr. Clin Genet. 2016 May;89(5):523-30. doi: 10.1111/cge.12598. Epub 2015 May 4. Clin Genet. 2016. PMID: 25867715 Review.

6

Zygotes segregate entire parental genomes in distinct blastomere lineages causing cleavage-stage chimerism and mixoploidy.

Destouni A, Zamani Esteki M, Catteeuw M, Tšuiko O, Dimitriadou E, Smits K, Kurg A, Salumets A, Van Soom A, Voet T, Vermeesch JR. Destouni A, et al. Genome Res. 2016 May;26(5):567-78. doi: 10.1101/gr.200527.115. Epub 2016 Apr 12. Genome Res. 2016. PMID: 27197242 Free PMC article.

7

Predicting fetoplacental chromosomal mosaicism during non-invasive prenatal testing.

Brison N, Neofytou M, Dehaspe L, Bayindir B, Van Den Bogaert K, Dardour L, Peeters H, Van Esch H, Van Buggenhout G, Vogels A, de Ravel T, Legius E, Devriendt K, Vermeesch JR. Brison N, et al. Prenat Diagn. 2018 Mar;38(4):258-266. doi: 10.1002/pd.5223. Epub 2018 Feb 19. Prenat Diagn. 2018. PMID: 29388226

8

A speculative outlook on embryonic aneuploidy: Can molecular pathways be involved?

Tšuiko O, Jatsenko T, Parameswaran Grace LK, Kurg A, Vermeesch JR, Lanner F, Altmäe S, Salumets A. Tšuiko O, et al. Dev Biol. 2019 Mar 1;447(1):3-13. doi: 10.1016/j.ydbio.2018.01.014. Epub 2018 Jan 31. Dev Biol. 2019. PMID: 29391166 Free article. Review.

9

NIPTmer: rapid k-mer-based software package for detection of fetal aneuploidies.

Sauk M, Žilina O, Kurg A, Ustav EL, Peters M, Paluoja P, Roost AM, Teder H, Palta P, Brison N, Vermeesch JR, Krjutškov K, Salumets A, Kaplinski L. Sauk M, et al. Sci Rep. 2018 Apr 4;8(1):5616. doi: 10.1038/s41598-018-23589-8. Sci Rep. 2018. PMID: 29618827 Free PMC article.

10

Fetal sex determination in twin pregnancies using non-invasive prenatal testing.

Villela D, Che H, Van Ghelue M, Dehaspe L, Brison N, Van Den Bogaert K, Devriendt K, Lewi L, Bayindir B, Vermeesch JR. Villela D, et al. NPJ Genom Med. 2019 Jul 4;4:15. doi: 10.1038/s41525-019-0089-4. eCollection 2019. NPJ Genom Med. 2019. PMID: 31285848 Free PMC article.

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