Wilmes P - Search Results

1

Systematic characterization of human gut microbiome-secreted molecules by integrated multi-omics.

De Saedeleer B, Malabirade A, Ramiro-Garcia J, Habier J, Trezzi JP, Peters SL, Daujeumont A, Halder R, Jäger C, Busi SB, May P, Oertel W, Mollenhauer B, Laczny CC, Hettich RL, Wilmes P. De Saedeleer B, et al. Among authors: wilmes p. ISME Commun. 2021 Dec 21;1:82. doi: 10.1038/s43705-021-00078-0. eCollection 2021 Dec 21. ISME Commun. 2021. PMID: 35106519 Free PMC article.

2

Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal.

Wilmes P, Andersson AF, Lefsrud MG, Wexler M, Shah M, Zhang B, Hettich RL, Bond PL, VerBerkmoes NC, Banfield JF. Wilmes P, et al. ISME J. 2008 Aug;2(8):853-64. doi: 10.1038/ismej.2008.38. Epub 2008 May 1. ISME J. 2008. PMID: 18449217 Free article.

3

A biomolecular isolation framework for eco-systems biology.

Roume H, Muller EE, Cordes T, Renaut J, Hiller K, Wilmes P. Roume H, et al. Among authors: wilmes p. ISME J. 2013 Jan;7(1):110-21. doi: 10.1038/ismej.2012.72. Epub 2012 Jul 5. ISME J. 2013. PMID: 22763648 Free PMC article.

4

Condensing the omics fog of microbial communities.

Muller EE, Glaab E, May P, Vlassis N, Wilmes P. Muller EE, et al. Among authors: wilmes p. Trends Microbiol. 2013 Jul;21(7):325-33. doi: 10.1016/j.tim.2013.04.009. Epub 2013 Jun 10. Trends Microbiol. 2013. PMID: 23764387

5

Alignment-free visualization of metagenomic data by nonlinear dimension reduction.

Laczny CC, Pinel N, Vlassis N, Wilmes P. Laczny CC, et al. Among authors: wilmes p. Sci Rep. 2014 Mar 31;4:4516. doi: 10.1038/srep04516. Sci Rep. 2014. PMID: 24682077 Free PMC article.

6

Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage.

Muller EE, Pinel N, Laczny CC, Hoopmann MR, Narayanasamy S, Lebrun LA, Roume H, Lin J, May P, Hicks ND, Heintz-Buschart A, Wampach L, Liu CM, Price LB, Gillece JD, Guignard C, Schupp JM, Vlassis N, Baliga NS, Moritz RL, Keim PS, Wilmes P. Muller EE, et al. Among authors: wilmes p. Nat Commun. 2014 Nov 26;5:5603. doi: 10.1038/ncomms6603. Nat Commun. 2014. PMID: 25424998 Free PMC article.

7

VizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data.

Laczny CC, Sternal T, Plugaru V, Gawron P, Atashpendar A, Margossian HH, Coronado S, der Maaten Lv, Vlassis N, Wilmes P. Laczny CC, et al. Among authors: wilmes p. Microbiome. 2015 Jan 20;3(1):1. doi: 10.1186/s40168-014-0066-1. eCollection 2015. Microbiome. 2015. PMID: 25621171 Free PMC article.

8

Phenotypic differentiation of gastrointestinal microbes is reflected in their encoded metabolic repertoires.

Bauer E, Laczny CC, Magnusdottir S, Wilmes P, Thiele I. Bauer E, et al. Among authors: wilmes p. Microbiome. 2015 Nov 30;3:55. doi: 10.1186/s40168-015-0121-6. Microbiome. 2015. PMID: 26617277 Free PMC article.

9

A microfluidics-based in vitro model of the gastrointestinal human-microbe interface.

Shah P, Fritz JV, Glaab E, Desai MS, Greenhalgh K, Frachet A, Niegowska M, Estes M, Jäger C, Seguin-Devaux C, Zenhausern F, Wilmes P. Shah P, et al. Among authors: wilmes p. Nat Commun. 2016 May 11;7:11535. doi: 10.1038/ncomms11535. Nat Commun. 2016. PMID: 27168102 Free PMC article.

10

Erratum to: Phenotypic differentiation of gastrointestinal microbes is reflected in their encoded metabolic repertoires.

Bauer E, Laczny CC, Magnusdottir S, Wilmes P, Thiele I. Bauer E, et al. Among authors: wilmes p. Microbiome. 2016 Jul 4;4(1):35. doi: 10.1186/s40168-016-0180-3. Microbiome. 2016. PMID: 27377779 Free PMC article. No abstract available.

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