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Multi-laboratory evaluation of the Illumina iSeq platform for whole genome sequencing of Salmonella, Escherichia coli and Listeria.
Mitchell PK, Wang L, Stanhope BJ, Cronk BD, Anderson R, Mohan S, Zhou L, Sanchez S, Bartlett P, Maddox C, DeShambo V, Mani R, Hengesbach LM, Gresch S, Wright K, Mor S, Zhang S, Shen Z, Yan L, Mackey R, Franklin-Guild R, Zhang Y, Prarat M, Shiplett K, Ramachandran A, Narayanan S, Sanders J, Hunkapiller AA, Lahmers K, Carbonello AA, Aulik N, Lim A, Cooper J, Jones A, Guag J, Nemser SM, Tyson GH, Timme R, Strain E, Reimschuessel R, Ceric O, Goodman LB. Mitchell PK, et al. Among authors: lim a. Microb Genom. 2022 Feb;8(2):000717. doi: 10.1099/mgen.0.000717. Microb Genom. 2022. PMID: 35113783 Free PMC article.
Optimized conditions for Listeria, Salmonella and Escherichia whole genome sequencing using the Illumina iSeq100 platform with point-and-click bioinformatic analysis.
Alvarez Narvaez S, Shen Z, Yan L, Stenger BLS, Goodman LB, Lim A, Nissly RH, Nair MS, Zhang S, Sanchez S. Alvarez Narvaez S, et al. Among authors: lim a. PLoS One. 2022 Nov 30;17(11):e0277659. doi: 10.1371/journal.pone.0277659. eCollection 2022. PLoS One. 2022. PMID: 36449522 Free PMC article.
SARS-CoV-2 and other respiratory pathogens are detected in continuous air samples from congregate settings.
Ramuta MD, Newman CM, Brakefield SF, Stauss MR, Wiseman RW, Kita-Yarbro A, O'Connor EJ, Dahal N, Lim A, Poulsen KP, Safdar N, Marx JA, Accola MA, Rehrauer WM, Zimmer JA, Khubbar M, Beversdorf LJ, Boehm EC, Castañeda D, Rushford C, Gregory DA, Yao JD, Bhattacharyya S, Johnson MC, Aliota MT, Friedrich TC, O'Connor DH, O'Connor SL. Ramuta MD, et al. Among authors: lim a. medRxiv [Preprint]. 2022 Mar 30:2022.03.29.22272716. doi: 10.1101/2022.03.29.22272716. medRxiv. 2022. Update in: Nat Commun. 2022 Aug 11;13(1):4717. doi: 10.1038/s41467-022-32406-w PMID: 35378751 Free PMC article. Updated. Preprint.
SARS-CoV-2 and other respiratory pathogens are detected in continuous air samples from congregate settings.
Ramuta MD, Newman CM, Brakefield SF, Stauss MR, Wiseman RW, Kita-Yarbro A, O'Connor EJ, Dahal N, Lim A, Poulsen KP, Safdar N, Marx JA, Accola MA, Rehrauer WM, Zimmer JA, Khubbar M, Beversdorf LJ, Boehm EC, Castañeda D, Rushford C, Gregory DA, Yao JD, Bhattacharyya S, Johnson MC, Aliota MT, Friedrich TC, O'Connor DH, O'Connor SL. Ramuta MD, et al. Among authors: lim a. Nat Commun. 2022 Aug 11;13(1):4717. doi: 10.1038/s41467-022-32406-w. Nat Commun. 2022. PMID: 35953484 Free PMC article.
Epidemiologic Characteristics Associated With Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Antigen-Based Test Results, Real-Time Reverse Transcription Polymerase Chain Reaction (rRT-PCR) Cycle Threshold Values, Subgenomic RNA, and Viral Culture Results From University Testing.
Ford L, Lee C, Pray IW, Cole D, Bigouette JP, Abedi GR, Bushman D, Delahoy MJ, Currie DW, Cherney B, Kirby MK, Fajardo GC, Caudill M, Langolf K, Kahrs J, Zochert T, Kelly P, Pitts C, Lim A, Aulik N, Tamin A, Harcourt JL, Queen K, Zhang J, Whitaker B, Browne H, Medrzycki M, Shewmaker PL, Bonenfant G, Zhou B, Folster JM, Bankamp B, Bowen MD, Thornburg NJ, Goffard K, Limbago B, Bateman A, Tate JE, Gieryn D, Kirking HL, Westergaard RP, Killerby ME; CDC COVID-19 Surge Laboratory Group. Ford L, et al. Among authors: lim a. Clin Infect Dis. 2021 Sep 15;73(6):e1348-e1355. doi: 10.1093/cid/ciab303. Clin Infect Dis. 2021. PMID: 33846714 Free PMC article.
Low SARS-CoV-2 Seroprevalence and No Active Infections among Dogs and Cats in Animal Shelters with Laboratory-Confirmed COVID-19 Human Cases among Employees.
Cossaboom CM, Medley AM, Spengler JR, Kukielka EA, Goryoka GW, Baird T, Bhavsar S, Campbell S, Campbell TS, Christensen D, Condrey JA, Dawson P, Doty JB, Feldpausch A, Gabel J, Jones D, Lim A, Loiacono CM, Jenkins-Moore M, Moore A, Noureddine C, Ortega J, Poulsen K, Rooney JA, Rossow J, Sheppard K, Sweet E, Stoddard R, Tell RM, Wallace RM, Williams C, Barton Behravesh C. Cossaboom CM, et al. Among authors: lim a. Biology (Basel). 2021 Sep 11;10(9):898. doi: 10.3390/biology10090898. Biology (Basel). 2021. PMID: 34571775 Free PMC article.
2,713 results