Cramer P - Search Results

1

Sequence determinants of human gene regulatory elements.

Sahu B, Hartonen T, Pihlajamaa P, Wei B, Dave K, Zhu F, Kaasinen E, Lidschreiber K, Lidschreiber M, Daub CO, Cramer P, Kivioja T, Taipale J. Sahu B, et al. Among authors: cramer p. Nat Genet. 2022 Mar;54(3):283-294. doi: 10.1038/s41588-021-01009-4. Epub 2022 Feb 21. Nat Genet. 2022. PMID: 35190730 Free PMC article.

2

Uniform transitions of the general RNA polymerase II transcription complex.

Mayer A, Lidschreiber M, Siebert M, Leike K, Söding J, Cramer P. Mayer A, et al. Among authors: cramer p. Nat Struct Mol Biol. 2010 Oct;17(10):1272-8. doi: 10.1038/nsmb.1903. Epub 2010 Sep 5. Nat Struct Mol Biol. 2010. PMID: 20818391

3

The spt5 C-terminal region recruits yeast 3' RNA cleavage factor I.

Mayer A, Schreieck A, Lidschreiber M, Leike K, Martin DE, Cramer P. Mayer A, et al. Among authors: cramer p. Mol Cell Biol. 2012 Apr;32(7):1321-31. doi: 10.1128/MCB.06310-11. Epub 2012 Jan 30. Mol Cell Biol. 2012. PMID: 22290438 Free PMC article.

4

MC EMiNEM maps the interaction landscape of the Mediator.

Niederberger T, Etzold S, Lidschreiber M, Maier KC, Martin DE, Fröhlich H, Cramer P, Tresch A. Niederberger T, et al. Among authors: cramer p. PLoS Comput Biol. 2012;8(6):e1002568. doi: 10.1371/journal.pcbi.1002568. Epub 2012 Jun 21. PLoS Comput Biol. 2012. PMID: 22737066 Free PMC article.

5

Cap completion and C-terminal repeat domain kinase recruitment underlie the initiation-elongation transition of RNA polymerase II.

Lidschreiber M, Leike K, Cramer P. Lidschreiber M, et al. Among authors: cramer p. Mol Cell Biol. 2013 Oct;33(19):3805-16. doi: 10.1128/MCB.00361-13. Epub 2013 Jul 22. Mol Cell Biol. 2013. PMID: 23878398 Free PMC article.

6

Structures of RNA polymerase II complexes with Bye1, a chromatin-binding PHF3/DIDO homologue.

Kinkelin K, Wozniak GG, Rothbart SB, Lidschreiber M, Strahl BD, Cramer P. Kinkelin K, et al. Among authors: cramer p. Proc Natl Acad Sci U S A. 2013 Sep 17;110(38):15277-82. doi: 10.1073/pnas.1311010110. Epub 2013 Sep 3. Proc Natl Acad Sci U S A. 2013. PMID: 24003114 Free PMC article.

7

The RNA polymerase II C-terminal domain-interacting domain of yeast Nrd1 contributes to the choice of termination pathway and couples to RNA processing by the nuclear exosome.

Heo DH, Yoo I, Kong J, Lidschreiber M, Mayer A, Choi BY, Hahn Y, Cramer P, Buratowski S, Kim M. Heo DH, et al. Among authors: cramer p. J Biol Chem. 2013 Dec 20;288(51):36676-90. doi: 10.1074/jbc.M113.508267. Epub 2013 Nov 6. J Biol Chem. 2013. PMID: 24196955 Free PMC article.

8

RNA polymerase II termination involves C-terminal-domain tyrosine dephosphorylation by CPF subunit Glc7.

Schreieck A, Easter AD, Etzold S, Wiederhold K, Lidschreiber M, Cramer P, Passmore LA. Schreieck A, et al. Among authors: cramer p. Nat Struct Mol Biol. 2014 Feb;21(2):175-179. doi: 10.1038/nsmb.2753. Epub 2014 Jan 12. Nat Struct Mol Biol. 2014. PMID: 24413056 Free PMC article.

9

Molecular basis for coordinating transcription termination with noncoding RNA degradation.

Tudek A, Porrua O, Kabzinski T, Lidschreiber M, Kubicek K, Fortova A, Lacroute F, Vanacova S, Cramer P, Stefl R, Libri D. Tudek A, et al. Among authors: cramer p. Mol Cell. 2014 Aug 7;55(3):467-81. doi: 10.1016/j.molcel.2014.05.031. Epub 2014 Jul 24. Mol Cell. 2014. PMID: 25066235 Free PMC article.

10

Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle.

Zacher B, Lidschreiber M, Cramer P, Gagneur J, Tresch A. Zacher B, et al. Among authors: cramer p. Mol Syst Biol. 2014 Dec 19;10(12):768. doi: 10.15252/msb.20145654. Mol Syst Biol. 2014. PMID: 25527639 Free PMC article.

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