Dougan KE - Search Results

1

Genome-powered classification of microbial eukaryotes: focus on coral algal symbionts.

Dougan KE, González-Pech RA, Stephens TG, Shah S, Chen Y, Ragan MA, Bhattacharya D, Chan CX. Dougan KE, et al. Trends Microbiol. 2022 Sep;30(9):831-840. doi: 10.1016/j.tim.2022.02.001. Epub 2022 Feb 25. Trends Microbiol. 2022. PMID: 35227551 Review.

2

Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium.

Iha C, Dougan KE, Varela JA, Avila V, Jackson CJ, Bogaert KA, Chen Y, Judd LM, Wick R, Holt KE, Pasella MM, Ricci F, Repetti SI, Medina M, Marcelino VR, Chan CX, Verbruggen H. Iha C, et al. Among authors: dougan ke. Curr Biol. 2021 Apr 12;31(7):1393-1402.e5. doi: 10.1016/j.cub.2021.01.018. Epub 2021 Feb 5. Curr Biol. 2021. PMID: 33548192 Free article.

3

Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium.

González-Pech RA, Stephens TG, Chen Y, Mohamed AR, Cheng Y, Shah S, Dougan KE, Fortuin MDA, Lagorce R, Burt DW, Bhattacharya D, Ragan MA, Chan CX. González-Pech RA, et al. Among authors: dougan ke. BMC Biol. 2021 Apr 13;19(1):73. doi: 10.1186/s12915-021-00994-6. BMC Biol. 2021. PMID: 33849527 Free PMC article.

4

Comparative Genomics Supports That Brazilian Bioethanol Saccharomyces cerevisiae Comprise a Unified Group of Domesticated Strains Related to Cachaça Spirit Yeasts.

Jacobus AP, Stephens TG, Youssef P, González-Pech R, Ciccotosto-Camp MM, Dougan KE, Chen Y, Basso LC, Frazzon J, Chan CX, Gross J. Jacobus AP, et al. Among authors: dougan ke. Front Microbiol. 2021 Apr 15;12:644089. doi: 10.3389/fmicb.2021.644089. eCollection 2021. Front Microbiol. 2021. PMID: 33936002 Free PMC article.

5

Alignment-Free Analysis of Whole-Genome Sequences From Symbiodiniaceae Reveals Different Phylogenetic Signals in Distinct Regions.

Lo R, Dougan KE, Chen Y, Shah S, Bhattacharya D, Chan CX. Lo R, et al. Among authors: dougan ke. Front Plant Sci. 2022 Apr 26;13:815714. doi: 10.3389/fpls.2022.815714. eCollection 2022. Front Plant Sci. 2022. PMID: 35557718 Free PMC article.

6

Genome-Guided Analysis of Seven Weed Species Reveals Conserved Sequence and Structural Features of Key Gene Targets for Herbicide Development.

Shah S, Lonhienne T, Murray CE, Chen Y, Dougan KE, Low YS, Williams CM, Schenk G, Walter GH, Guddat LW, Chan CX. Shah S, et al. Among authors: dougan ke. Front Plant Sci. 2022 Jun 29;13:909073. doi: 10.3389/fpls.2022.909073. eCollection 2022. Front Plant Sci. 2022. PMID: 35845697 Free PMC article.

7

Improved Cladocopium goreaui Genome Assembly Reveals Features of a Facultative Coral Symbiont and the Complex Evolutionary History of Dinoflagellate Genes.

Chen Y, Shah S, Dougan KE, van Oppen MJH, Bhattacharya D, Chan CX. Chen Y, et al. Among authors: dougan ke. Microorganisms. 2022 Aug 17;10(8):1662. doi: 10.3390/microorganisms10081662. Microorganisms. 2022. PMID: 36014080 Free PMC article.

8

Gene duplication is the primary driver of intraspecific genomic divergence in coral algal symbionts.

Shah S, Dougan KE, Chen Y, Bhattacharya D, Chan CX. Shah S, et al. Among authors: dougan ke. Open Biol. 2023 Sep;13(9):230182. doi: 10.1098/rsob.230182. Epub 2023 Sep 27. Open Biol. 2023. PMID: 37751888 Free PMC article.

9

Multi-omics analysis reveals the molecular response to heat stress in a "red tide" dinoflagellate.

Dougan KE, Deng ZL, Wöhlbrand L, Reuse C, Bunk B, Chen Y, Hartlich J, Hiller K, John U, Kalvelage J, Mansky J, Neumann-Schaal M, Overmann J, Petersen J, Sanchez-Garcia S, Schmidt-Hohagen K, Shah S, Spröer C, Sztajer H, Wang H, Bhattacharya D, Rabus R, Jahn D, Chan CX, Wagner-Döbler I. Dougan KE, et al. Genome Biol. 2023 Nov 23;24(1):265. doi: 10.1186/s13059-023-03107-4. Genome Biol. 2023. PMID: 37996937 Free PMC article.

10

Genome-wide transcriptome analysis reveals the diversity and function of long non-coding RNAs in dinoflagellates.

Chen Y, Dougan KE, Nguyen Q, Bhattacharya D, Chan CX. Chen Y, et al. Among authors: dougan ke. NAR Genom Bioinform. 2024 Feb 10;6(1):lqae016. doi: 10.1093/nargab/lqae016. eCollection 2024 Mar. NAR Genom Bioinform. 2024. PMID: 38344275 Free PMC article.

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