Oda Y - Search Results

1

CsrA-Controlled Proteins Reveal New Dimensions of Acinetobacter baumannii Desiccation Tolerance.

Oda Y, Shapiro MM, Lewis NM, Zhong X, Huse HK, Zhong W, Bruce JE, Manoil C, Harwood CS. Oda Y, et al. J Bacteriol. 2022 Apr 19;204(4):e0047921. doi: 10.1128/jb.00479-21. Epub 2022 Mar 28. J Bacteriol. 2022. PMID: 35285725 Free PMC article.

2

Functional genomic analysis of three nitrogenase isozymes in the photosynthetic bacterium Rhodopseudomonas palustris.

Oda Y, Samanta SK, Rey FE, Wu L, Liu X, Yan T, Zhou J, Harwood CS. Oda Y, et al. J Bacteriol. 2005 Nov;187(22):7784-94. doi: 10.1128/JB.187.22.7784-7794.2005. J Bacteriol. 2005. PMID: 16267302 Free PMC article.

3

Regulation of uptake hydrogenase and effects of hydrogen utilization on gene expression in Rhodopseudomonas palustris.

Rey FE, Oda Y, Harwood CS. Rey FE, et al. Among authors: oda y. J Bacteriol. 2006 Sep;188(17):6143-52. doi: 10.1128/JB.00381-06. J Bacteriol. 2006. PMID: 16923881 Free PMC article.

4

Characterization of anaerobic catabolism of p-coumarate in Rhodopseudomonas palustris by integrating transcriptomics and quantitative proteomics.

Pan C, Oda Y, Lankford PK, Zhang B, Samatova NF, Pelletier DA, Harwood CS, Hettich RL. Pan C, et al. Among authors: oda y. Mol Cell Proteomics. 2008 May;7(5):938-48. doi: 10.1074/mcp.M700147-MCP200. Epub 2007 Dec 20. Mol Cell Proteomics. 2008. PMID: 18156135 Free article.

5

A new class of homoserine lactone quorum-sensing signals.

Schaefer AL, Greenberg EP, Oliver CM, Oda Y, Huang JJ, Bittan-Banin G, Peres CM, Schmidt S, Juhaszova K, Sufrin JR, Harwood CS. Schaefer AL, et al. Among authors: oda y. Nature. 2008 Jul 31;454(7204):595-9. doi: 10.1038/nature07088. Epub 2008 Jun 18. Nature. 2008. PMID: 18563084

6

Multiple genome sequences reveal adaptations of a phototrophic bacterium to sediment microenvironments.

Oda Y, Larimer FW, Chain PS, Malfatti S, Shin MV, Vergez LM, Hauser L, Land ML, Braatsch S, Beatty JT, Pelletier DA, Schaefer AL, Harwood CS. Oda Y, et al. Proc Natl Acad Sci U S A. 2008 Nov 25;105(47):18543-8. doi: 10.1073/pnas.0809160105. Epub 2008 Nov 19. Proc Natl Acad Sci U S A. 2008. PMID: 19020098 Free PMC article.

7

Activity of the Rhodopseudomonas palustris p-coumaroyl-homoserine lactone-responsive transcription factor RpaR.

Hirakawa H, Oda Y, Phattarasukol S, Armour CD, Castle JC, Raymond CK, Lappala CR, Schaefer AL, Harwood CS, Greenberg EP. Hirakawa H, et al. Among authors: oda y. J Bacteriol. 2011 May;193(10):2598-607. doi: 10.1128/JB.01479-10. Epub 2011 Mar 4. J Bacteriol. 2011. PMID: 21378182 Free PMC article.

8

How posttranslational modification of nitrogenase is circumvented in Rhodopseudomonas palustris strains that produce hydrogen gas constitutively.

Heiniger EK, Oda Y, Samanta SK, Harwood CS. Heiniger EK, et al. Among authors: oda y. Appl Environ Microbiol. 2012 Feb;78(4):1023-32. doi: 10.1128/AEM.07254-11. Epub 2011 Dec 16. Appl Environ Microbiol. 2012. PMID: 22179236 Free PMC article.

9

Identification of a p-coumarate degradation regulon in Rhodopseudomonas palustris by Xpression, an integrated tool for prokaryotic RNA-seq data processing.

Phattarasukol S, Radey MC, Lappala CR, Oda Y, Hirakawa H, Brittnacher MJ, Harwood CS. Phattarasukol S, et al. Among authors: oda y. Appl Environ Microbiol. 2012 Oct;78(19):6812-8. doi: 10.1128/AEM.01418-12. Epub 2012 Jul 13. Appl Environ Microbiol. 2012. PMID: 22798355 Free PMC article.

10

Non-growing Rhodopseudomonas palustris increases the hydrogen gas yield from acetate by shifting from the glyoxylate shunt to the tricarboxylic acid cycle.

McKinlay JB, Oda Y, Rühl M, Posto AL, Sauer U, Harwood CS. McKinlay JB, et al. Among authors: oda y. J Biol Chem. 2014 Jan 24;289(4):1960-70. doi: 10.1074/jbc.M113.527515. Epub 2013 Dec 3. J Biol Chem. 2014. PMID: 24302724 Free PMC article.

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