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The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development.
BMC Bioinformatics. 2022 Mar 22;23(1):99. doi: 10.1186/s12859-022-04636-8.
BMC Bioinformatics. 2022.
PMID: 35317743
Free PMC article.
Xenbase: Facilitating the Use of Xenopus to Model Human Disease.
Nenni MJ, Fisher ME, James-Zorn C, Pells TJ, Ponferrada V, Chu S, Fortriede JD, Burns KA, Wang Y, Lotay VS, Wang DZ, Segerdell E, Chaturvedi P, Karimi K, Vize PD, Zorn AM.
Nenni MJ, et al.
Front Physiol. 2019 Feb 26;10:154. doi: 10.3389/fphys.2019.00154. eCollection 2019.
Front Physiol. 2019.
PMID: 30863320
Free PMC article.
Review.
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Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database.
Fortriede JD, Pells TJ, Chu S, Chaturvedi P, Wang D, Fisher ME, James-Zorn C, Wang Y, Nenni MJ, Burns KA, Lotay VS, Ponferrada VG, Karimi K, Zorn AM, Vize PD.
Fortriede JD, et al. Among authors: nenni mj.
Nucleic Acids Res. 2020 Jan 8;48(D1):D776-D782. doi: 10.1093/nar/gkz933.
Nucleic Acids Res. 2020.
PMID: 31733057
Free PMC article.
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Single cell RNA analysis of the left-right organizer transcriptome reveals potential novel heterotaxy genes.
Bellchambers HM, Phatak AR, Nenni MJ, Padua MB, Gao H, Liu Y, Ware SM.
Bellchambers HM, et al. Among authors: nenni mj.
Sci Rep. 2023 Jul 1;13(1):10688. doi: 10.1038/s41598-023-36862-2.
Sci Rep. 2023.
PMID: 37393374
Free PMC article.
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