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Effect of childhood vaccination and antibiotic use on pneumococcal populations and genome-wide associations with disease among children in Nepal: an observational study.
Kandasamy R, Lo S, Gurung M, Carter MJ, Gladstone R, Lees J, Shrestha S, Thorson S, Bijukchhe S, Gautam MC, Shrestha R, Gurung S, Khadka B, McGee L, Breiman RF, Murdoch DR, Kelly DF, Shrestha S, Bentley SD, Pollard AJ. Kandasamy R, et al. Among authors: bentley sd. Lancet Microbe. 2022 Jul;3(7):e503-e511. doi: 10.1016/S2666-5247(22)00066-0. Epub 2022 May 9. Lancet Microbe. 2022. PMID: 35779566 Free PMC article.
Rapid pneumococcal evolution in response to clinical interventions.
Croucher NJ, Harris SR, Fraser C, Quail MA, Burton J, van der Linden M, McGee L, von Gottberg A, Song JH, Ko KS, Pichon B, Baker S, Parry CM, Lambertsen LM, Shahinas D, Pillai DR, Mitchell TJ, Dougan G, Tomasz A, Klugman KP, Parkhill J, Hanage WP, Bentley SD. Croucher NJ, et al. Among authors: bentley sd. Science. 2011 Jan 28;331(6016):430-4. doi: 10.1126/science.1198545. Science. 2011. PMID: 21273480 Free PMC article.
A high-resolution view of genome-wide pneumococcal transformation.
Croucher NJ, Harris SR, Barquist L, Parkhill J, Bentley SD. Croucher NJ, et al. Among authors: bentley sd. PLoS Pathog. 2012;8(6):e1002745. doi: 10.1371/journal.ppat.1002745. Epub 2012 Jun 14. PLoS Pathog. 2012. PMID: 22719250 Free PMC article.
Pneumococcal capsular switching: a historical perspective.
Wyres KL, Lambertsen LM, Croucher NJ, McGee L, von Gottberg A, Liñares J, Jacobs MR, Kristinsson KG, Beall BW, Klugman KP, Parkhill J, Hakenbeck R, Bentley SD, Brueggemann AB. Wyres KL, et al. Among authors: bentley sd. J Infect Dis. 2013 Feb 1;207(3):439-49. doi: 10.1093/infdis/jis703. Epub 2012 Nov 21. J Infect Dis. 2013. PMID: 23175765 Free PMC article.
Whole-genome sequencing to establish relapse or re-infection with Mycobacterium tuberculosis: a retrospective observational study.
Bryant JM, Harris SR, Parkhill J, Dawson R, Diacon AH, van Helden P, Pym A, Mahayiddin AA, Chuchottaworn C, Sanne IM, Louw C, Boeree MJ, Hoelscher M, McHugh TD, Bateson AL, Hunt RD, Mwaigwisya S, Wright L, Gillespie SH, Bentley SD. Bryant JM, et al. Among authors: bentley sd. Lancet Respir Med. 2013 Dec;1(10):786-92. doi: 10.1016/S2213-2600(13)70231-5. Epub 2013 Nov 21. Lancet Respir Med. 2013. PMID: 24461758 Free PMC article. Clinical Trial.
Evidence for soft selective sweeps in the evolution of pneumococcal multidrug resistance and vaccine escape.
Croucher NJ, Chewapreecha C, Hanage WP, Harris SR, McGee L, van der Linden M, Song JH, Ko KS, de Lencastre H, Turner C, Yang F, Sá-Leão R, Beall B, Klugman KP, Parkhill J, Turner P, Bentley SD. Croucher NJ, et al. Among authors: bentley sd. Genome Biol Evol. 2014 Jun 10;6(7):1589-602. doi: 10.1093/gbe/evu120. Genome Biol Evol. 2014. PMID: 24916661 Free PMC article.
Variable recombination dynamics during the emergence, transmission and 'disarming' of a multidrug-resistant pneumococcal clone.
Croucher NJ, Hanage WP, Harris SR, McGee L, van der Linden M, de Lencastre H, Sá-Leão R, Song JH, Ko KS, Beall B, Klugman KP, Parkhill J, Tomasz A, Kristinsson KG, Bentley SD. Croucher NJ, et al. Among authors: bentley sd. BMC Biol. 2014 Jun 23;12:49. doi: 10.1186/1741-7007-12-49. BMC Biol. 2014. PMID: 24957517 Free PMC article.
Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages.
Hilty M, Wüthrich D, Salter SJ, Engel H, Campbell S, Sá-Leão R, de Lencastre H, Hermans P, Sadowy E, Turner P, Chewapreecha C, Diggle M, Pluschke G, McGee L, Eser ÖK, Low DE, Smith-Vaughan H, Endimiani A, Küffer M, Dupasquier M, Beaudoing E, Weber J, Bruggmann R, Hanage WP, Parkhill J, Hathaway LJ, Mühlemann K, Bentley SD. Hilty M, et al. Among authors: bentley sd. Genome Biol Evol. 2014 Dec 4;6(12):3281-94. doi: 10.1093/gbe/evu263. Genome Biol Evol. 2014. PMID: 25480686 Free PMC article.
380 results