Gumbart JC - Search Results

1

The Role of Extracellular Loops in the Folding of Outer Membrane Protein X (OmpX) of Escherichia coli.

Hermansen S, Ryoo D, Orwick-Rydmark M, Saragliadis A, Gumbart JC, Linke D. Hermansen S, et al. Among authors: gumbart jc. Front Mol Biosci. 2022 Jul 14;9:918480. doi: 10.3389/fmolb.2022.918480. eCollection 2022. Front Mol Biosci. 2022. PMID: 35911955 Free PMC article.

2

BamA is required for autotransporter secretion.

Ryoo D, Rydmark MO, Pang YT, Lundquist KP, Linke D, Gumbart JC. Ryoo D, et al. Among authors: gumbart jc. Biochim Biophys Acta Gen Subj. 2020 Jul;1864(7):129581. doi: 10.1016/j.bbagen.2020.129581. Epub 2020 Feb 27. Biochim Biophys Acta Gen Subj. 2020. PMID: 32114025 Free PMC article.

3

Inward-facing glycine residues create sharp turns in β-barrel membrane proteins.

Zhang Z, Ryoo D, Balusek C, Acharya A, Rydmark MO, Linke D, Gumbart JC. Zhang Z, et al. Among authors: gumbart jc. Biochim Biophys Acta Biomembr. 2021 Oct 1;1863(10):183662. doi: 10.1016/j.bbamem.2021.183662. Epub 2021 Jun 17. Biochim Biophys Acta Biomembr. 2021. PMID: 34097860 Free PMC article.

4

Plasticity within the barrel domain of BamA mediates a hybrid-barrel mechanism by BAM.

Wu R, Bakelar JW, Lundquist K, Zhang Z, Kuo KM, Ryoo D, Pang YT, Sun C, White T, Klose T, Jiang W, Gumbart JC, Noinaj N. Wu R, et al. Among authors: gumbart jc. Nat Commun. 2021 Dec 8;12(1):7131. doi: 10.1038/s41467-021-27449-4. Nat Commun. 2021. PMID: 34880256 Free PMC article.

5

Adaptation of the periplasm to maintain spatial constraints essential for cell envelope processes and cell viability.

Mandela E, Stubenrauch CJ, Ryoo D, Hwang H, Cohen EJ, Torres VL, Deo P, Webb CT, Huang C, Schittenhelm RB, Beeby M, Gumbart JC, Lithgow T, Hay ID. Mandela E, et al. Among authors: gumbart jc. Elife. 2022 Jan 27;11:e73516. doi: 10.7554/eLife.73516. Elife. 2022. PMID: 35084330 Free PMC article.

6

Modeling intermediates of BamA folding an outer membrane protein.

Kuo KM, Ryoo D, Lundquist K, Gumbart JC. Kuo KM, et al. Among authors: gumbart jc. Biophys J. 2022 Sep 6;121(17):3242-3252. doi: 10.1016/j.bpj.2022.07.027. Epub 2022 Aug 4. Biophys J. 2022. PMID: 35927955 Free PMC article.

7

Extraction of Dielectric Permittivity from Atomistic Molecular Dynamics Simulations and Microwave Measurements.

Saad-Falcon A, Zhang Z, Ryoo D, Dee J, Westafer RS, Gumbart JC. Saad-Falcon A, et al. Among authors: gumbart jc. J Phys Chem B. 2022 Oct 13;126(40):8021-8029. doi: 10.1021/acs.jpcb.2c05260. Epub 2022 Sep 28. J Phys Chem B. 2022. PMID: 36171073

8

Thicket and Mesh: How the Outer Membrane Can Resist Tension Imposed by the Cell Wall.

Ryoo D, Hwang H, Gumbart JC. Ryoo D, et al. Among authors: gumbart jc. J Phys Chem B. 2024 Jun 6;128(22):5371-5377. doi: 10.1021/acs.jpcb.3c08510. Epub 2024 May 24. J Phys Chem B. 2024. PMID: 38787347 Free PMC article.

9

Living on the edge: Simulations of bacterial outer-membrane proteins.

Pavlova A, Hwang H, Lundquist K, Balusek C, Gumbart JC. Pavlova A, et al. Among authors: gumbart jc. Biochim Biophys Acta. 2016 Jul;1858(7 Pt B):1753-9. doi: 10.1016/j.bbamem.2016.01.020. Epub 2016 Jan 28. Biochim Biophys Acta. 2016. PMID: 26826270 Free article. Review.

10

Role of the Native Outer-Membrane Environment on the Transporter BtuB.

Balusek C, Gumbart JC. Balusek C, et al. Among authors: gumbart jc. Biophys J. 2016 Oct 4;111(7):1409-1417. doi: 10.1016/j.bpj.2016.08.033. Biophys J. 2016. PMID: 27705764 Free PMC article.

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