Palsson BO - Search Results

1

Integration of physiologically relevant photosynthetic energy flows into whole genome models of light-driven metabolism.

Broddrick JT, Ware MA, Jallet D, Palsson BO, Peers G. Broddrick JT, et al. Among authors: palsson bo. Plant J. 2022 Nov;112(3):603-621. doi: 10.1111/tpj.15965. Epub 2022 Sep 22. Plant J. 2022. PMID: 36053127 Free PMC article.

2

Metabolic network reconstruction of Chlamydomonas offers insight into light-driven algal metabolism.

Chang RL, Ghamsari L, Manichaikul A, Hom EF, Balaji S, Fu W, Shen Y, Hao T, Palsson BØ, Salehi-Ashtiani K, Papin JA. Chang RL, et al. Among authors: palsson bo. Mol Syst Biol. 2011 Aug 2;7:518. doi: 10.1038/msb.2011.52. Mol Syst Biol. 2011. PMID: 21811229 Free PMC article.

3

Genome-scale models of metabolism and gene expression extend and refine growth phenotype prediction.

O'Brien EJ, Lerman JA, Chang RL, Hyduke DR, Palsson BØ. O'Brien EJ, et al. Among authors: palsson bo. Mol Syst Biol. 2013 Oct 1;9:693. doi: 10.1038/msb.2013.52. Mol Syst Biol. 2013. PMID: 24084808 Free PMC article.

4

Using Genome-scale Models to Predict Biological Capabilities.

O'Brien EJ, Monk JM, Palsson BO. O'Brien EJ, et al. Among authors: palsson bo. Cell. 2015 May 21;161(5):971-987. doi: 10.1016/j.cell.2015.05.019. Cell. 2015. PMID: 26000478 Free PMC article. Review.

5

Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom.

Levering J, Broddrick J, Dupont CL, Peers G, Beeri K, Mayers J, Gallina AA, Allen AE, Palsson BO, Zengler K. Levering J, et al. Among authors: palsson bo. PLoS One. 2016 May 6;11(5):e0155038. doi: 10.1371/journal.pone.0155038. eCollection 2016. PLoS One. 2016. PMID: 27152931 Free PMC article.

6

Unique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis.

Broddrick JT, Rubin BE, Welkie DG, Du N, Mih N, Diamond S, Lee JJ, Golden SS, Palsson BO. Broddrick JT, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2016 Dec 20;113(51):E8344-E8353. doi: 10.1073/pnas.1613446113. Epub 2016 Dec 1. Proc Natl Acad Sci U S A. 2016. PMID: 27911809 Free PMC article.

7

Quantitative time-course metabolomics in human red blood cells reveal the temperature dependence of human metabolic networks.

Yurkovich JT, Zielinski DC, Yang L, Paglia G, Rolfsson O, Sigurjónsson ÓE, Broddrick JT, Bordbar A, Wichuk K, Brynjólfsson S, Palsson S, Gudmundsson S, Palsson BO. Yurkovich JT, et al. Among authors: palsson s, palsson bo. J Biol Chem. 2017 Dec 1;292(48):19556-19564. doi: 10.1074/jbc.M117.804914. Epub 2017 Oct 13. J Biol Chem. 2017. PMID: 29030425 Free PMC article.

8

Predicting the metabolic capabilities of Synechococcus elongatus PCC 7942 adapted to different light regimes.

Broddrick JT, Welkie DG, Jallet D, Golden SS, Peers G, Palsson BO. Broddrick JT, et al. Among authors: palsson bo. Metab Eng. 2019 Mar;52:42-56. doi: 10.1016/j.ymben.2018.11.001. Epub 2018 Nov 13. Metab Eng. 2019. PMID: 30439494 Free PMC article.

9

A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types.

Seif Y, Monk JM, Mih N, Tsunemoto H, Poudel S, Zuniga C, Broddrick J, Zengler K, Palsson BO. Seif Y, et al. Among authors: palsson bo. PLoS Comput Biol. 2019 Jan 9;15(1):e1006644. doi: 10.1371/journal.pcbi.1006644. eCollection 2019 Jan. PLoS Comput Biol. 2019. PMID: 30625152 Free PMC article.

10

Cross-compartment metabolic coupling enables flexible photoprotective mechanisms in the diatom Phaeodactylum tricornutum.

Broddrick JT, Du N, Smith SR, Tsuji Y, Jallet D, Ware MA, Peers G, Matsuda Y, Dupont CL, Mitchell BG, Palsson BO, Allen AE. Broddrick JT, et al. Among authors: palsson bo. New Phytol. 2019 May;222(3):1364-1379. doi: 10.1111/nph.15685. Epub 2019 Feb 14. New Phytol. 2019. PMID: 30636322 Free PMC article.

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