Rawat P - Search Results

1

Development of a High-Affinity Antibody against the Tumor-Specific and Hyperactive 611-p95HER2 Isoform.

Dorraji E, Borgen E, Segura-Peña D, Rawat P, Smorodina E, Dunn C, Greiff V, Sekulić N, Russnes H, Kyte JA. Dorraji E, et al. Among authors: rawat p. Cancers (Basel). 2022 Oct 5;14(19):4859. doi: 10.3390/cancers14194859. Cancers (Basel). 2022. PMID: 36230782 Free PMC article.

2

Progress and challenges for the machine learning-based design of fit-for-purpose monoclonal antibodies.

Akbar R, Bashour H, Rawat P, Robert PA, Smorodina E, Cotet TS, Flem-Karlsen K, Frank R, Mehta BB, Vu MH, Zengin T, Gutierrez-Marcos J, Lund-Johansen F, Andersen JT, Greiff V. Akbar R, et al. Among authors: rawat p. MAbs. 2022 Jan-Dec;14(1):2008790. doi: 10.1080/19420862.2021.2008790. MAbs. 2022. PMID: 35293269 Free PMC article. Review.

3

Predicting the immune escape of SARS-CoV-2 neutralizing antibodies upon mutation.

Sharma D, Rawat P, Greiff V, Janakiraman V, Gromiha MM. Sharma D, et al. Among authors: rawat p. Biochim Biophys Acta Mol Basis Dis. 2024 Feb;1870(2):166959. doi: 10.1016/j.bbadis.2023.166959. Epub 2023 Nov 13. Biochim Biophys Acta Mol Basis Dis. 2024. PMID: 37967796

4

ExpoSeq: simplified analysis of high-throughput sequencing data from antibody discovery campaigns.

Sørensen CV, Hofmann N, Rawat P, Sørensen FV, Ljungars A, Greiff V, Laustsen AH, Jenkins TP. Sørensen CV, et al. Among authors: rawat p. Bioinform Adv. 2024 Feb 10;4(1):vbae020. doi: 10.1093/bioadv/vbae020. eCollection 2024. Bioinform Adv. 2024. PMID: 38425781 Free PMC article.

5

Effect of charged mutation on aggregation of a pentapeptide: Insights from molecular dynamics simulations.

Prabakaran R, Rawat P, Yasuo N, Sekijima M, Kumar S, Gromiha MM. Prabakaran R, et al. Among authors: rawat p. Proteins. 2022 Feb;90(2):405-417. doi: 10.1002/prot.26230. Epub 2021 Sep 21. Proteins. 2022. PMID: 34460128

6

An in-silico method for identifying aggregation rate enhancer and mitigator mutations in proteins.

Rawat P, Kumar S, Michael Gromiha M. Rawat P, et al. Int J Biol Macromol. 2018 Oct 15;118(Pt A):1157-1167. doi: 10.1016/j.ijbiomac.2018.06.102. Epub 2018 Jun 24. Int J Biol Macromol. 2018. PMID: 29949748

7

Exploring antibody repurposing for COVID-19: beyond presumed roles of therapeutic antibodies.

Rawat P, Sharma D, Srivastava A, Janakiraman V, Gromiha MM. Rawat P, et al. Sci Rep. 2021 May 13;11(1):10220. doi: 10.1038/s41598-021-89621-6. Sci Rep. 2021. PMID: 33986382 Free PMC article.

8

Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus-related antibodies.

Rawat P, Sharma D, Prabakaran R, Ridha F, Mohkhedkar M, Janakiraman V, Gromiha MM. Rawat P, et al. Bioinformatics. 2022 Aug 10;38(16):4051-4052. doi: 10.1093/bioinformatics/btac439. Bioinformatics. 2022. PMID: 35771624

9

Exploring the sequence features determining amyloidosis in human antibody light chains.

Rawat P, Prabakaran R, Kumar S, Gromiha MM. Rawat P, et al. Sci Rep. 2021 Jul 2;11(1):13785. doi: 10.1038/s41598-021-93019-9. Sci Rep. 2021. PMID: 34215782 Free PMC article.

10

Elucidating important structural features for the binding affinity of spike - SARS-CoV-2 neutralizing antibody complexes.

Sharma D, Rawat P, Janakiraman V, Gromiha MM. Sharma D, et al. Among authors: rawat p. Proteins. 2022 Mar;90(3):824-834. doi: 10.1002/prot.26277. Epub 2021 Nov 17. Proteins. 2022. PMID: 34761442 Free PMC article.

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