Chen YA - Search Results

1

Snaq: A Dynamic Snakemake Pipeline for Microbiome Data Analysis With QIIME2.

Mohsen A, Chen YA, Allendes Osorio RS, Higuchi C, Mizuguchi K. Mohsen A, et al. Among authors: chen ya. Front Bioinform. 2022 Jul 1;2:893933. doi: 10.3389/fbinf.2022.893933. eCollection 2022. Front Bioinform. 2022. PMID: 36304319 Free PMC article.

2

TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery.

Chen YA, Tripathi LP, Mizuguchi K. Chen YA, et al. PLoS One. 2011 Mar 8;6(3):e17844. doi: 10.1371/journal.pone.0017844. PLoS One. 2011. PMID: 21408081 Free PMC article.

3

Proteomic analysis of hepatitis C virus (HCV) core protein transfection and host regulator PA28γ knockout in HCV pathogenesis: a network-based study.

Tripathi LP, Kambara H, Moriishi K, Morita E, Abe T, Mori Y, Chen YA, Matsuura Y, Mizuguchi K. Tripathi LP, et al. Among authors: chen ya. J Proteome Res. 2012 Jul 6;11(7):3664-79. doi: 10.1021/pr300121a. Epub 2012 Jun 12. J Proteome Res. 2012. PMID: 22646850

4

Inhibitory roles of signal transducer and activator of transcription 3 in antitumor immunity during carcinogen-induced lung tumorigenesis.

Ihara S, Kida H, Arase H, Tripathi LP, Chen YA, Kimura T, Yoshida M, Kashiwa Y, Hirata H, Fukamizu R, Inoue R, Hasegawa K, Goya S, Takahashi R, Minami T, Tsujino K, Suzuki M, Kohmo S, Inoue K, Nagatomo I, Takeda Y, Kijima T, Mizuguchi K, Tachibana I, Kumanogoh A. Ihara S, et al. Among authors: chen ya. Cancer Res. 2012 Jun 15;72(12):2990-9. doi: 10.1158/0008-5472.CAN-11-4062. Epub 2012 Jun 1. Cancer Res. 2012. PMID: 22659452

5

Sagace: a web-based search engine for biomedical databases in Japan.

Morita M, Igarashi Y, Ito M, Chen YA, Nagao C, Sakaguchi Y, Sakate R, Masui T, Mizuguchi K. Morita M, et al. Among authors: chen ya. BMC Res Notes. 2012 Oct 31;5:604. doi: 10.1186/1756-0500-5-604. BMC Res Notes. 2012. PMID: 23110816 Free PMC article.

6

Understanding the biological context of NS5A-host interactions in HCV infection: a network-based approach.

Tripathi LP, Kambara H, Chen YA, Nishimura Y, Moriishi K, Okamoto T, Morita E, Abe T, Mori Y, Matsuura Y, Mizuguchi K. Tripathi LP, et al. Among authors: chen ya. J Proteome Res. 2013 Jun 7;12(6):2537-51. doi: 10.1021/pr3011217. Epub 2013 May 17. J Proteome Res. 2013. PMID: 23682656

7

Integrated pathway clusters with coherent biological themes for target prioritisation.

Chen YA, Tripathi LP, Dessailly BH, Nyström-Persson J, Ahmad S, Mizuguchi K. Chen YA, et al. PLoS One. 2014 Jun 11;9(6):e99030. doi: 10.1371/journal.pone.0099030. eCollection 2014. PLoS One. 2014. PMID: 24918583 Free PMC article.

8

Brefeldin A-inhibited guanine nucleotide-exchange protein 3 (BIG3) is predicted to interact with its partner through an ARM-type α-helical structure.

Chen YA, Murakami Y, Ahmad S, Yoshimaru T, Katagiri T, Mizuguchi K. Chen YA, et al. BMC Res Notes. 2014 Jul 6;7:435. doi: 10.1186/1756-0500-7-435. BMC Res Notes. 2014. PMID: 24997568 Free PMC article.

9

BIG3 Inhibits the Estrogen-Dependent Nuclear Translocation of PHB2 via Multiple Karyopherin-Alpha Proteins in Breast Cancer Cells.

Kim NH, Yoshimaru T, Chen YA, Matsuo T, Komatsu M, Miyoshi Y, Tanaka E, Sasa M, Mizuguchi K, Katagiri T. Kim NH, et al. Among authors: chen ya. PLoS One. 2015 Jun 8;10(6):e0127707. doi: 10.1371/journal.pone.0127707. eCollection 2015. PLoS One. 2015. PMID: 26052702 Free PMC article.

10

An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework.

Chen YA, Tripathi LP, Mizuguchi K. Chen YA, et al. Database (Oxford). 2016 Mar 17;2016:baw009. doi: 10.1093/database/baw009. Print 2016. Database (Oxford). 2016. PMID: 26989145 Free PMC article.

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