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Page 1
Evaluation of multi-assay algorithms for cross-sectional HIV incidence estimation in settings with universal antiretroviral treatment.
Grant-McAuley W, Laeyendecker O, Monaco D, Chen A, Hudelson SE, Klock E, Brookmeyer R, Morrison D, Piwowar-Manning E, Morrison CS, Hayes R, Ayles H, Bock P, Kosloff B, Shanaube K, Mandla N, van Deventer A, Ruczinski I, Kammers K, Larman HB, Eshleman SH. Grant-McAuley W, et al. Among authors: ruczinski i. BMC Infect Dis. 2022 Nov 11;22(1):838. doi: 10.1186/s12879-022-07850-0. BMC Infect Dis. 2022. PMID: 36368950 Free PMC article.
Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn.
Liebhoff AM, Venkataraman T, Morgenlander WR, Na M, Kula T, Waugh K, Morrison C, Rewers M, Longman R, Round J, Elledge S, Ruczinski I, Langmead B, Larman HB. Liebhoff AM, et al. Among authors: ruczinski i. bioRxiv [Preprint]. 2023 Jul 31:2023.07.30.551179. doi: 10.1101/2023.07.30.551179. bioRxiv. 2023. Update in: Nat Commun. 2024 Feb 21;15(1):1577. doi: 10.1038/s41467-024-45601-8. PMID: 37577562 Free PMC article. Updated. Preprint.
Comprehensive profiling of pre-infection antibodies identifies HIV targets associated with viremic control and viral load.
Grant-McAuley W, Morgenlander W, Hudelson SE, Thakar M, Piwowar-Manning E, Clarke W, Breaud A, Blankson J, Wilson E, Ayles H, Bock P, Moore A, Kosloff B, Shanaube K, Meehan SA, van Deventer A, Fidler S, Hayes R, Ruczinski I, Kammers K, Laeyendecker O, Larman HB, Eshleman SH. Grant-McAuley W, et al. Among authors: ruczinski i. Front Immunol. 2023 Sep 6;14:1178520. doi: 10.3389/fimmu.2023.1178520. eCollection 2023. Front Immunol. 2023. PMID: 37744365 Free PMC article. Clinical Trial.
Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn.
Liebhoff AM, Venkataraman T, Morgenlander WR, Na M, Kula T, Waugh K, Morrison C, Rewers M, Longman R, Round J, Elledge S, Ruczinski I, Langmead B, Larman HB. Liebhoff AM, et al. Among authors: ruczinski i. Nat Commun. 2024 Feb 21;15(1):1577. doi: 10.1038/s41467-024-45601-8. Nat Commun. 2024. PMID: 38383452 Free PMC article.
Precision arbovirus serology with a pan-arbovirus peptidome.
Morgenlander WR, Chia WN, Parra B, Monaco DR, Ragan I, Pardo CA, Bowen R, Zhong D, Norris DE, Ruczinski I, Durbin A, Wang LF, Larman HB, Robinson ML. Morgenlander WR, et al. Among authors: ruczinski i. Nat Commun. 2024 Jul 11;15(1):5833. doi: 10.1038/s41467-024-49461-0. Nat Commun. 2024. PMID: 38992033 Free PMC article.
Identification of antibody targets associated with lower HIV viral load and viremic control.
Grant-McAuley W, Morgenlander WR, Ruczinski I, Kammers K, Laeyendecker O, Hudelson SE, Thakar M, Piwowar-Manning E, Clarke W, Breaud A, Ayles H, Bock P, Moore A, Kosloff B, Shanaube K, Meehan SA, van Deventer A, Fidler S, Hayes R, Larman HB, Eshleman SH; HPTN 071 (PopART) Study Team. Grant-McAuley W, et al. Among authors: ruczinski i. PLoS One. 2024 Sep 17;19(9):e0305976. doi: 10.1371/journal.pone.0305976. eCollection 2024. PLoS One. 2024. PMID: 39288118 Free PMC article. Clinical Trial.
Genome sequencing unveils a regulatory landscape of platelet reactivity.
Keramati AR, Chen MH, Rodriguez BAT, Yanek LR, Bhan A, Gaynor BJ, Ryan K, Brody JA, Zhong X, Wei Q; NHLBI Trans-Omics for Precision (TOPMed) Consortium; Kammers K, Kanchan K, Iyer K, Kowalski MH, Pitsillides AN, Cupples LA, Li B, Schlaeger TM, Shuldiner AR, O'Connell JR, Ruczinski I, Mitchell BD, Faraday N, Taub MA, Becker LC, Lewis JP, Mathias RA, Johnson AD. Keramati AR, et al. Among authors: ruczinski i. Nat Commun. 2021 Jun 15;12(1):3626. doi: 10.1038/s41467-021-23470-9. Nat Commun. 2021. PMID: 34131117 Free PMC article.
HLA-associated outcomes in peanut oral immunotherapy trials identify mechanistic and clinical determinants of therapeutic success.
Kanchan K, Shankar G, Huffaker MF, Bahnson HT, Chinthrajah RS, Sanda S, Manohar M, Ling H, Paschall JE, Toit GD, Ruczinski I, Togias A, Lack G, Nadeau KC, Jones SM, Nepom GT, Mathias RA. Kanchan K, et al. Among authors: ruczinski i. Front Immunol. 2022 Nov 18;13:941839. doi: 10.3389/fimmu.2022.941839. eCollection 2022. Front Immunol. 2022. PMID: 36466872 Free PMC article.
Epidermal differentiation complex genetic variation in atopic dermatitis and peanut allergy.
Huffaker MF, Kanchan K, Bahnson HT, Ruczinski I, Shankar G, Leung DYM, Baloh C, Du Toit G, Lack G, Nepom GT, Mathias RA. Huffaker MF, et al. Among authors: ruczinski i. J Allergy Clin Immunol. 2023 Apr;151(4):1137-1142.e4. doi: 10.1016/j.jaci.2022.11.008. Epub 2022 Nov 17. J Allergy Clin Immunol. 2023. PMID: 36403663 Free article.
242 results