Chopyk J - Search Results

1

Characterization of SARS-CoV-2 Distribution and Microbial Succession in a Clinical Microbiology Testing Facility during the SARS-CoV-2 Pandemic.

Sah GP, Kovalick G, Chopyk J, Kuo P, Huang L, Ghatbale P, Das P, Realegeno S, Knight R, Gilbert JA, Pride DT. Sah GP, et al. Among authors: chopyk j. Microbiol Spectr. 2023 Mar 14;11(2):e0450922. doi: 10.1128/spectrum.04509-22. Online ahead of print. Microbiol Spectr. 2023. PMID: 36916973 Free PMC article.

2

Fecal virome transplantation is sufficient to alter fecal microbiota and drive lean and obese body phenotypes in mice.

Borin JM, Liu R, Wang Y, Wu TC, Chopyk J, Huang L, Kuo P, Ghose C, Meyer JR, Tu XM, Schnabl B, Pride DT. Borin JM, et al. Among authors: chopyk j. Gut Microbes. 2023 Jan-Dec;15(1):2236750. doi: 10.1080/19490976.2023.2236750. Gut Microbes. 2023. PMID: 37475473 Free PMC article.

3

Common antibiotics, azithromycin and amoxicillin, affect gut metagenomics within a household.

Chopyk J, Cobián Güemes AG, Ramirez-Sanchez C, Attai H, Ly M, Jones MB, Liu R, Liu C, Yang K, Tu XM, Abeles SR, Nelson K, Pride DT. Chopyk J, et al. BMC Microbiol. 2023 Aug 2;23(1):206. doi: 10.1186/s12866-023-02949-z. BMC Microbiol. 2023. PMID: 37528343 Free PMC article.

4

Oral microbiome dysbiosis among cigarette smokers and smokeless tobacco users compared to non-users.

Chattopadhyay S, Malayil L, Chopyk J, Smyth E, Kulkarni P, Raspanti G, Thomas SB, Sapkota A, Mongodin EF, Sapkota AR. Chattopadhyay S, et al. Among authors: chopyk j. Sci Rep. 2024 May 6;14(1):10394. doi: 10.1038/s41598-024-60730-2. Sci Rep. 2024. PMID: 38710815 Free PMC article.

5

Fecal virome transplantation is sufficient to alter fecal microbiota and drive lean and obese body phenotypes in mice.

Borin JM, Liu R, Wang Y, Wu TC, Chopyk J, Huang L, Kuo P, Ghose C, Meyer JR, Tu XM, Schnabl B, Pride DT. Borin JM, et al. Among authors: chopyk j. bioRxiv [Preprint]. 2023 Feb 4:2023.02.03.527064. doi: 10.1101/2023.02.03.527064. bioRxiv. 2023. Update in: Gut Microbes. 2023 Jan-Dec;15(1):2236750. doi: 10.1080/19490976.2023.2236750 PMID: 36778328 Free PMC article. Updated. Preprint.

6

Bacteriophage-Mediated Perturbation of Defined Bacterial Communities in an In Vitro Model of the Human Gut.

Attai H, Wilde J, Liu R, Chopyk J, Garcia AG, Allen-Vercoe E, Pride D. Attai H, et al. Among authors: chopyk j. Microbiol Spectr. 2022 Jun 29;10(3):e0113522. doi: 10.1128/spectrum.01135-22. Epub 2022 May 31. Microbiol Spectr. 2022. PMID: 35638779 Free PMC article.

7

Compositional Differences in the Oral Microbiome of E-cigarette Users.

Chopyk J, Bojanowski CM, Shin J, Moshensky A, Fuentes AL, Bonde SS, Chuki D, Pride DT, Crotty Alexander LE. Chopyk J, et al. Front Microbiol. 2021 May 31;12:599664. doi: 10.3389/fmicb.2021.599664. eCollection 2021. Front Microbiol. 2021. PMID: 34135868 Free PMC article.

8

Impact of Vaginal Estrogen on the Urobiome in Postmenopausal Women With Recurrent Urinary Tract Infection.

Jung CE, Estaki M, Chopyk J, Taylor BC, Gonzalez A, McDonald D, Shin J, Ferrante K, Wasenda E, Lippmann Q, Knight R, Pride D, Lukacz ES. Jung CE, et al. Among authors: chopyk j. Female Pelvic Med Reconstr Surg. 2022 Jan 1;28(1):20-26. doi: 10.1097/SPV.0000000000001051. Female Pelvic Med Reconstr Surg. 2022. PMID: 33978602 Clinical Trial.

9

Seasonal dynamics in taxonomy and function within bacterial and viral metagenomic assemblages recovered from a freshwater agricultural pond.

Chopyk J, Nasko DJ, Allard S, Bui A, Pop M, Mongodin EF, Sapkota AR. Chopyk J, et al. Environ Microbiome. 2020 Oct 28;15(1):18. doi: 10.1186/s40793-020-00365-8. Environ Microbiome. 2020. PMID: 33902740 Free PMC article.

10

Intestinal Virome in Patients With Alcoholic Hepatitis.

Jiang L, Lang S, Duan Y, Zhang X, Gao B, Chopyk J, Schwanemann LK, Ventura-Cots M, Bataller R, Bosques-Padilla F, Verna EC, Abraldes JG, Brown RS Jr, Vargas V, Altamirano J, Caballería J, Shawcross DL, Ho SB, Louvet A, Lucey MR, Mathurin P, Garcia-Tsao G, Kisseleva T, Brenner DA, Tu XM, Stärkel P, Pride D, Fouts DE, Schnabl B. Jiang L, et al. Among authors: chopyk j. Hepatology. 2020 Dec;72(6):2182-2196. doi: 10.1002/hep.31459. Epub 2020 Oct 10. Hepatology. 2020. PMID: 32654263 Free PMC article.

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