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1,181 results

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Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi.
Gupta YK, Marcelino-Guimarães FC, Lorrain C, Farmer A, Haridas S, Ferreira EGC, Lopes-Caitar VS, Oliveira LS, Morin E, Widdison S, Cameron C, Inoue Y, Thor K, Robinson K, Drula E, Henrissat B, LaButti K, Bini AMR, Paget E, Singan V, Daum C, Dorme C, van Hoek M, Janssen A, Chandat L, Tarriotte Y, Richardson J, Melo BDVA, Wittenberg AHJ, Schneiders H, Peyrard S, Zanardo LG, Holtman VC, Coulombier-Chauvel F, Link TI, Balmer D, Müller AN, Kind S, Bohnert S, Wirtz L, Chen C, Yan M, Ng V, Gautier P, Meyer MC, Voegele RT, Liu Q, Grigoriev IV, Conrath U, Brommonschenkel SH, Loehrer M, Schaffrath U, Sirven C, Scalliet G, Duplessis S, van Esse HP. Gupta YK, et al. Among authors: farmer a. Nat Commun. 2023 Apr 1;14(1):1835. doi: 10.1038/s41467-023-37551-4. Nat Commun. 2023. PMID: 37005409 Free PMC article.
The assembled transcriptome of the adult horn fly, Haematobia irritans.
Domingues LN, Guerrero FD, Cameron C, Farmer A, Bendele KG, Foil LD. Domingues LN, et al. Among authors: farmer a. Data Brief. 2018 Jul 2;19:1933-1940. doi: 10.1016/j.dib.2018.06.095. eCollection 2018 Aug. Data Brief. 2018. PMID: 30229068 Free PMC article.
Continuous detection of Chikungunya Virus in a passive surveillance system in southern Thailand, 2012-2019.
Farmer A, Anderson KB, Buddhari D, Hortiwakul T, Charernmak B, Thaisomboonsuk B, Wongstitwilairoong T, Hunsawong T, Klungthong C, Chinnawirotpisan P, Chusri S, Fernandez S. Farmer A, et al. PLoS Negl Trop Dis. 2025 Jan 7;19(1):e0012776. doi: 10.1371/journal.pntd.0012776. Online ahead of print. PLoS Negl Trop Dis. 2025. PMID: 39775078 Free article.
Reconciling heterogeneous dengue virus infection risk estimates from different study designs.
Huang AT, Buddhari D, Kaewhiran S, Iamsirithaworn S, Khampaen D, Farmer A, Fernandez S, Thomas SJ, Rodriguez-Barraquer I, Hunsawong T, Srikiatkhachorn A, Ribeiro Dos Santos G, O'Driscoll M, Hamins-Puertolas M, Endy T, Rothman AL, Cummings DAT, Anderson K, Salje H. Huang AT, et al. Among authors: farmer a. Proc Natl Acad Sci U S A. 2025 Jan 7;122(1):e2411768121. doi: 10.1073/pnas.2411768121. Epub 2024 Dec 31. Proc Natl Acad Sci U S A. 2025. PMID: 39739790 Free PMC article.
Predicting the infecting dengue serotype from antibody titre data using machine learning.
Cracknell Daniels B, Buddhari D, Hunsawong T, Iamsirithaworn S, Farmer AR, Cummings DAT, Anderson KB, Dorigatti I. Cracknell Daniels B, et al. Among authors: farmer ar. PLoS Comput Biol. 2024 Dec 23;20(12):e1012188. doi: 10.1371/journal.pcbi.1012188. eCollection 2024 Dec. PLoS Comput Biol. 2024. PMID: 39715263 Free PMC article.
Linking multiple serological assays to infer dengue virus infections from paired samples using mixture models.
Hamins-Puértolas M, Buddhari D, Salje H, Huang AT, Hunsawong T, Cummings DAT, Fernandez S, Farmer A, Kaewhiran S, Khampaen D, Srikiatkhachorn A, Iamsirithaworn S, Waickman A, Thomas SJ, Endy T, Rothman AL, Anderson KB, Rodriguez-Barraquer I. Hamins-Puértolas M, et al. Among authors: farmer a. medRxiv [Preprint]. 2024 Dec 10:2024.12.08.24318683. doi: 10.1101/2024.12.08.24318683. medRxiv. 2024. PMID: 39711706 Free PMC article. Preprint.
Genetic diversity of dengue virus circulating in the Philippines (2014-2019) and comparison with dengue vaccine strains.
Velasco JM, Klungthong C, Chinnawirotpisan P, Diones PC, Valderama MT, Leonardia S, Manasatienkij W, Joonlasak K, Rodpradit P, Mateo J, Vila V 2nd, Navarro FC, Jones A, Farmer A, Fernandez S. Velasco JM, et al. Among authors: farmer a. PLoS Negl Trop Dis. 2024 Dec 19;18(12):e0012697. doi: 10.1371/journal.pntd.0012697. eCollection 2024 Dec. PLoS Negl Trop Dis. 2024. PMID: 39700304 Free PMC article.
1,181 results