Fukuzawa K - Search Results

1

Quantum Chemical Interaction Analysis between SARS-CoV-2 Main Protease and Ensitrelvir Compared with Its Initial Screening Hit.

Watanabe C, Tanaka S, Okiyama Y, Yuki H, Ohyama T, Kamisaka K, Takaya D, Fukuzawa K, Honma T. Watanabe C, et al. Among authors: fukuzawa k. J Phys Chem Lett. 2023 Apr 20;14(15):3609-3620. doi: 10.1021/acs.jpclett.2c03768. Epub 2023 Apr 6. J Phys Chem Lett. 2023. PMID: 37023394

2

Intra- and intermolecular interactions between cyclic-AMP receptor protein and DNA: ab initio fragment molecular orbital study.

Fukuzawa K, Komeiji Y, Mochizuki Y, Kato A, Nakano T, Tanaka S. Fukuzawa K, et al. J Comput Chem. 2006 Jun;27(8):948-60. doi: 10.1002/jcc.20399. J Comput Chem. 2006. PMID: 16586530

3

Molecular interactions between estrogen receptor and its ligand studied by the ab initio fragment molecular orbital method.

Fukuzawa K, Mochizuki Y, Tanaka S, Kitaura K, Nakano T. Fukuzawa K, et al. J Phys Chem B. 2006 Aug 17;110(32):16102-10. doi: 10.1021/jp060770i. J Phys Chem B. 2006. PMID: 16898767

4

Ab initio fragment molecular orbital study of molecular interactions between liganded retinoid X receptor and its coactivator: roles of helix 12 in the coactivator binding mechanism.

Ito M, Fukuzawa K, Mochizuki Y, Nakano T, Tanaka S. Ito M, et al. Among authors: fukuzawa k. J Phys Chem B. 2007 Apr 5;111(13):3525-33. doi: 10.1021/jp070054w. Epub 2007 Mar 9. J Phys Chem B. 2007. PMID: 17388485

5

DNA and estrogen receptor interaction revealed by fragment molecular orbital calculations.

Watanabe T, Inadomi Y, Fukuzawa K, Nakano T, Tanaka S, Nilsson L, Nagashima U. Watanabe T, et al. Among authors: fukuzawa k. J Phys Chem B. 2007 Aug 16;111(32):9621-7. doi: 10.1021/jp071710v. Epub 2007 Jul 25. J Phys Chem B. 2007. PMID: 17649990

6

Visualization analysis of inter-fragment interaction energies of CRP-cAMP-DNA complex based on the fragment molecular orbital method.

Kurisaki I, Fukuzawa K, Komeiji Y, Mochizuki Y, Nakano T, Imada J, Chmielewski A, Rothstein SM, Watanabe H, Tanaka S. Kurisaki I, et al. Among authors: fukuzawa k. Biophys Chem. 2007 Oct;130(1-2):1-9. doi: 10.1016/j.bpc.2007.06.011. Epub 2007 Jul 5. Biophys Chem. 2007. PMID: 17656003

7

Ab initio fragment molecular orbital study of molecular interactions between liganded retinoid X receptor and its coactivator; part II: influence of mutations in transcriptional activation function 2 activating domain core on the molecular interactions.

Ito M, Fukuzawa K, Mochizuki Y, Nakano T, Tanaka S. Ito M, et al. Among authors: fukuzawa k. J Phys Chem A. 2008 Mar 13;112(10):1986-98. doi: 10.1021/jp075430r. Epub 2007 Nov 17. J Phys Chem A. 2008. PMID: 18020317

8

Theoretical analysis of binding specificity of influenza viral hemagglutinin to avian and human receptors based on the fragment molecular orbital method.

Iwata T, Fukuzawa K, Nakajima K, Aida-Hyugaji S, Mochizuki Y, Watanabe H, Tanaka S. Iwata T, et al. Among authors: fukuzawa k. Comput Biol Chem. 2008 Jun;32(3):198-211. doi: 10.1016/j.compbiolchem.2008.03.006. Comput Biol Chem. 2008. PMID: 18485828 Free article.

9

Ab initio fragment molecular orbital study of molecular interactions in liganded retinoid X receptor: specification of residues associated with ligand inducible information transmission.

Ito M, Fukuzawa K, Ishikawa T, Mochizuki Y, Nakano T, Tanaka S. Ito M, et al. Among authors: fukuzawa k. J Phys Chem B. 2008 Sep 25;112(38):12081-94. doi: 10.1021/jp803369x. Epub 2008 Aug 27. J Phys Chem B. 2008. PMID: 18729504

10

Fragment molecular orbital calculations on red fluorescent proteins (DsRed and mFruits).

Taguchi N, Mochizuki Y, Nakano T, Amari S, Fukuzawa K, Ishikawa T, Sakurai M, Tanaka S. Taguchi N, et al. Among authors: fukuzawa k. J Phys Chem B. 2009 Jan 29;113(4):1153-61. doi: 10.1021/jp808151c. J Phys Chem B. 2009. PMID: 19127982

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