Anthon C - Search Results

1

Letter to the editor: Testing on external independent datasets is necessary to corroborate machine learning model improvement.

Corsi GI, Anthon C, Gorodkin J. Corsi GI, et al. Among authors: anthon c. Bioinformatics. 2023 Jun 1;39(6):btad327. doi: 10.1093/bioinformatics/btad327. Bioinformatics. 2023. PMID: 37202356 Free PMC article. No abstract available.

2

CRISPRon/off: CRISPR/Cas9 on- and off-target gRNA design.

Anthon C, Corsi GI, Gorodkin J. Anthon C, et al. Bioinformatics. 2022 Dec 13;38(24):5437-5439. doi: 10.1093/bioinformatics/btac697. Bioinformatics. 2022. PMID: 36271848 Free PMC article.

3

Quality Assessment of Domesticated Animal Genome Assemblies.

Seemann SE, Anthon C, Palasca O, Gorodkin J. Seemann SE, et al. Among authors: anthon c. Bioinform Biol Insights. 2016 Jun 6;9(Suppl 4):49-58. doi: 10.4137/BBI.S29333. eCollection 2015. Bioinform Biol Insights. 2016. PMID: 27279738 Free PMC article.

4

CRISPR-Cas9 off-targeting assessment with nucleic acid duplex energy parameters.

Alkan F, Wenzel A, Anthon C, Havgaard JH, Gorodkin J. Alkan F, et al. Among authors: anthon c. Genome Biol. 2018 Oct 26;19(1):177. doi: 10.1186/s13059-018-1534-x. Genome Biol. 2018. PMID: 30367669 Free PMC article.

5

Multiple Sequence Alignments Enhance Boundary Definition of RNA Structures.

Sabarinathan R, Anthon C, Gorodkin J, Seemann SE. Sabarinathan R, et al. Among authors: anthon c. Genes (Basel). 2018 Dec 4;9(12):604. doi: 10.3390/genes9120604. Genes (Basel). 2018. PMID: 30518121 Free PMC article.

6

Novel circRNA discovery in sheep shows evidence of high backsplice junction conservation.

Varela-Martínez E, Corsi GI, Anthon C, Gorodkin J, Jugo BM. Varela-Martínez E, et al. Among authors: anthon c. Sci Rep. 2021 Jan 11;11(1):427. doi: 10.1038/s41598-020-79781-2. Sci Rep. 2021. PMID: 33432020 Free PMC article.

7

Enhancing CRISPR-Cas9 gRNA efficiency prediction by data integration and deep learning.

Xiang X, Corsi GI, Anthon C, Qu K, Pan X, Liang X, Han P, Dong Z, Liu L, Zhong J, Ma T, Wang J, Zhang X, Jiang H, Xu F, Liu X, Xu X, Wang J, Yang H, Bolund L, Church GM, Lin L, Gorodkin J, Luo Y. Xiang X, et al. Among authors: anthon c. Nat Commun. 2021 May 28;12(1):3238. doi: 10.1038/s41467-021-23576-0. Nat Commun. 2021. PMID: 34050182 Free PMC article.

8

Massively targeted evaluation of therapeutic CRISPR off-targets in cells.

Pan X, Qu K, Yuan H, Xiang X, Anthon C, Pashkova L, Liang X, Han P, Corsi GI, Xu F, Liu P, Zhong J, Zhou Y, Ma T, Jiang H, Liu J, Wang J, Jessen N, Bolund L, Yang H, Xu X, Church GM, Gorodkin J, Lin L, Luo Y. Pan X, et al. Among authors: anthon c. Nat Commun. 2022 Jul 13;13(1):4049. doi: 10.1038/s41467-022-31543-6. Nat Commun. 2022. PMID: 35831290 Free PMC article.

9

The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression.

Corsi GI, Gadekar VP, Haukedal H, Doncheva NT, Anthon C, Ambardar S, Palakodeti D, Hyttel P, Freude K, Seemann SE, Gorodkin J. Corsi GI, et al. Among authors: anthon c. Neurobiol Dis. 2023 Mar;178:105980. doi: 10.1016/j.nbd.2022.105980. Epub 2022 Dec 23. Neurobiol Dis. 2023. PMID: 36572121 Free article.

10

Gender and Obesity Specific MicroRNA Expression in Adipose Tissue from Lean and Obese Pigs.

Mentzel CM, Anthon C, Jacobsen MJ, Karlskov-Mortensen P, Bruun CS, Jørgensen CB, Gorodkin J, Cirera S, Fredholm M. Mentzel CM, et al. Among authors: anthon c. PLoS One. 2015 Jul 29;10(7):e0131650. doi: 10.1371/journal.pone.0131650. eCollection 2015. PLoS One. 2015. PMID: 26222688 Free PMC article.

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